1. Home
  2. Mutant Lines
  3. GT15262

GT15262

CSHL Arabidopsis genetrap mutant lines

Original: GT15262

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15262

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18427825 [Map]; Strand: c
      • AT2G44680.2 - [+] show detail - casein kinase II beta subunit 4
        Distance: 0; Region: exon2 (CDS)
      • AT2G44680.1 - [+] show detail - casein kinase II beta subunit 4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15262 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCATCTG 
    ATCCTTCACT ATCCGTGTCA GATTCAACTG CATCCACAAA GAATCAAAAT 
    TTATAATTAC CCAAATCAGA AAGTACTAAA ACCACATGAA ATTGAAATTG 
    AGTGAGATAT AAGCAATTAA CCATCGGGGG AACGAGAATG AAGCTGAGAT 
    TTAGCAGTTG AAGTAGAAGG GAAAGAATCT TTGTCCTTAG AAGTGAAAAC 
    CCTAGATGTA GAAGGTGAAG ATTTCTTAAG ATGTTTGTCT AAAGCATCAT 
    TGATTCGTTT CCGATCAATA GCTCCACCAA GGATCTCCGA TCTCGATGAT 
    CCACCACCAC CCATTATTCC TCCTCCACTC CGATCCTTGT ACATAACTCG 
    ATTCGATTCC CTCAATGAAA AAAACAAAAA TTTTCAGCTT TAGATTCTCA 
    AAGTCTTCGA CTTTCTTATC ATCAGAGGAA GAAGAGGGGC GGATAAATCT 
    AGGGTTTGTT TTTTCTTCGA TAGTTTGATC ACCGAGTAGA AGAAAGAGAG 
    AAGAAGAGAT AAAGAGTGCT CTGCTTTTCC CCGTGGGTTT TT

AT2G44680.1

Model type
Protein coding
Short Description
casein kinase II beta subunit 4
Curator Summary
Encodes casein kinase II beta chain, a CK2 regulatory subunit. Nuclear-localized CKB4 protein exists in vivo as different isoforms, resulting from phosphorylation on serine residues. The phosphorylated isoforms are the preferred substrate for ubiquitination and degradation by the proteasome pathway. Involved in regulation of circadian clock.
Computational Description
casein kinase II beta subunit 4 (CKB4); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 3 (TAIR:AT3G60250.1); Has 1093 Blast hits to 1091 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 429; Fungi - 285; Plants - 156; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G44680.2

Model type
Protein coding
Short Description
casein kinase II beta subunit 4
Curator Summary
Encodes casein kinase II beta chain, a CK2 regulatory subunit. Nuclear-localized CKB4 protein exists in vivo as different isoforms, resulting from phosphorylation on serine residues. The phosphorylated isoforms are the preferred substrate for ubiquitination and degradation by the proteasome pathway. Involved in regulation of circadian clock.
Computational Description
casein kinase II beta subunit 4 (CKB4); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II beta chain 3 (TAIR:AT3G60250.2); Has 1093 Blast hits to 1091 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 429; Fungi - 285; Plants - 156; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink).
Link
InterPro Scan - TAIR