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GT15267

CSHL Arabidopsis genetrap mutant lines

Original: GT15267

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15267

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59729 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -443; Region: promoter
    Flanking Genome Sequence: GT15267 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACA 
    CAAAAGGAAA TAACGACAGC CCCTTTGAGA TAAAACAAAA CAAAACAATA 
    TCCCAAATAT AGTTTGTAAG CCACAAAGTT TTAATCATGA AAATAAATTA 
    TAAGAAAACA AAAACATTCC CAATGTATTA TGACATCCTT TTTTTTTTTT 
    TGGGGGAGGG TTTTGGGCCC TCAAATTTCC GGGCACCCCC CAAAAAAGGG 
    GGAAAAAGGG TTTTTTTTAA AAAGGTTTCC GGGATTTCAA AAAAAAAAAA 
    AAAATTTTTA AAAGGTTTCC AAAACTTTTG GTTTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59782 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -496; Region: promoter
    Flanking Genome Sequence: GT15267 - 5-prime edge 
    CCTACTTTCT CCCTGCTTTT GTGTGATCTT TGTCCCCAAT AGTTTGTTTT 
    AGGGTTTGGA CAAGCTTTTG GATCATCTTT ATCAAATTAA CCACTCAAAT 
    CACCCAATCC ATTGTACGAG CTAAACCACA TATTGCAGTG CTTATATTAA 
    TTTGTGTTTC CTTTTTTTTT TTTTTTTTGC CCCGGGAAAA TTTTAATTTT 
    TTAAAACCAA AAAAGGGGGA AAAAAAAACT TTTTTTTTTT GGGGGTCCCC 
    CAAAAAAAAT TTTTTTTTTT TTTTTGTTTT TAACCCAAAA GAAAAAAAAA 
    GGGCCCGTTT TTTAAAAAAA TTTTTTTTTT TTTTTAAAAA AAAAGGGGGT 
    TTTTTTTTTT TTTCCGGGAA AAAAAAAAAC CTTTTTTTTG GGGAACCTTT 
    TTTTTTTTAA AAAAAAAAAG GTTAAAAAAC TCTGAAAAGT TTTTTTTTTT 
    GGGGAAAGTT AAACCCCCCA AAATTTTAAA AAAAAAGGGG GGGGTCTTTT 
    TTTTTGGGCA AAAAGGGGGC CCCCCCCCCC CCCTTTTTTT TGGAAAAAAA 
    AAAGAAAAAA CCCCCCCCAA AAAAAAAAAA CAAAAAAAAG GGGGGGGGTT 
    TTTTAAAA

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR