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GT15308

CSHL Arabidopsis genetrap mutant lines

Original: GT15308

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15308

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28318282 [Map]; Strand: w
      • AT1G75450.1 - [+] show detail - cytokinin oxidase 5
        Distance: 0; Region: exon1 (5UTR)
      • AT1G75450.2 - [+] show detail - cytokinin oxidase 5
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15308 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACC 
    CAAACCGAAA AAAGAGAGAA TCTGTGCATG TTGCTCAGAA AATCTTCAAA 
    GCGTAATCTG GGCTTACGTT AGCTCTCACG AACCCCCAAG GATCTTCTAT 
    ATATGTTTTT TCATTTCCCC ATAAAATCTT TCATTATCTA AAAAATATTA 
    TTATCGTATC TTTTTTCTTC TATATATTCT TCCTCCTCAA TCTTGATTCT 
    TGTTTCTTGA GTATTCTTTG ATGAATCGTG AAATGACGTC AAGCTTT

AT1G75450.1

Model type
Protein coding
Short Description
cytokinin oxidase 5
Curator Summary
This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Computational Description
cytokinin oxidase 5 (CKX5); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 6615 Blast hits to 6610 proteins in 1194 species: Archae - 154; Bacteria - 4290; Metazoa - 145; Fungi - 1218; Plants - 369; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G75450.2

Model type
Protein coding
Short Description
cytokinin oxidase 5
Curator Summary
This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Computational Description
cytokinin oxidase 5 (CKX5); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1).
Link
InterPro Scan - TAIR