1. Home
  2. Mutant Lines
  3. GT15312

GT15312

CSHL Arabidopsis genetrap mutant lines

Original: GT15312

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15312

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19559664 [Map]; Strand: w
      • AT2G47720.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 2525; Region: intergenic
      • AT2G47740.1 - [+] show detail - pre-tRNA
        Distance: 191; Region: intergenic
    Flanking Genome Sequence: GT15312 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATAAC 
    CACTTATCTT GGTTCCCAAG GCGTCATGCA ATTGCAGAGC AAGCAACTTA 
    TCTTCGGTTG AAACCGATTG AGTTTAAAGT CCGGCTCTTG AACAAAGCCA 
    TATAATTAAG GTTATTCTCA GCTTAACAGT TATTGGATTA TTGGAGTCCT 
    TTAGTCAATA TTGGTTCGTG ACATTTAACC TCTTCATTGG TAAAATGTAA 
    CGGTTTTGCA AATTTGGCGT TTAAACTCTG GTTTTTAATT GCACAAATGT 
    GAATGAACCC AACAATAACA CAAAAGAGGA GGATGNATGA TGACATAAAT 
    AATACTTGAA AACACAAGTA CATAAGCCAA GAAAAGAAAA TCACTGGACT 
    CGTTTATTTG GGCAAAAGGA AAAGAAAAGA AGTGAAGAAA GAGAGAGGGT 
    CACTACTGCT TCTGGAGGTC AATAACCTTA GCCCAAGCAG GCCTGGCAGA 
    GATCTTCTAA ATCCACCTCG CATAACCTTA GGGCGAGAGT CAAAGAGCAC 
    CTTGGAGTCA GTACCCAACA AGTAATGGAT GGCTGGGAGG TGGTGAAGAT 
    CAGCAAGAGT GAAGGAATCA CCAGCCAAGA ACTCAGATTT GGCGAGCCTA 
    GCCTCGTAGA CATCCAAGAC TTTCTGGAGC TTACCTTCGA GCTCTTGGAC 
    AGCGGCAGGG TCAGTGGTCA TGCCGAACAT GCCTTTAAGA CACGCTCGAA 
    GGCAAGCTTA GAGGCGTTAG GGTCAAACTG TTGACCTTCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19559724 [Map]; Strand: w
      • AT2G47720.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 2585; Region: intergenic
      • AT2G47740.1 - [+] show detail - pre-tRNA
        Distance: 131; Region: intergenic
    Flanking Genome Sequence: GT15312 - 5-prime edge 
    CTTTCTCCCT GGTGGTTATG CCCTTAAGAA AACAGAGCAC CAATGAGCTG 
    AGAGTTTGGG AGATCTCTTG CGATGAGGAT CATGACTCAG TACATTCCTA 
    AACTATTCTC GTATCCACTG AGTTACTCGT ACAAATCCAT AAATGACCAT 
    ACAAAGTAGC CTCTCGTGTG AAAATAGTGA TAACAATTAA AAATGAAAAA 
    ATGCGCATCC AGGGAATCGA ACCCTGGTCA GTACCGTGGG AGGGTACTAT 
    GATACCACTA CACCAGATGC GCTTTTTATT ATGCTGACAA GTTTTTTATT 
    ATTAACTCTA ACATTTGTTC TGCCGGGAAA GTTTCCTGAT GATAGTAAGA 
    AACAGAGCAA CTCGAAAGAG AAGACAATGG CGCGAGGAGG ATTTGAAGAT 
    AACGAAACCA GAGAAAGCCT GCACTGAAGT TAGAAAACGG TGAAGGAAGA 
    AGAAGAAACA GAGTAGAGGA AGTGGTAACG CCGTAGCGGT GAAGCAACGA 
    CGTCCGTCTT AAGTCGATAA AATTTCTTAT AAATATGTTT TATGGAAATT 
    TGGAAAACTA ACCTTAAAAA AAACTATAAT TAAGAAAGTA ACACTAACAA 
    AAAAATGAGA TGAAATTTTT TATATTTTAT ATATTAATCA CAACTTTACC 
    CTCCTTCCTT

AT2G47720.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G62770.1); Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47740.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gly (anticodon: CCC)
Link
InterPro Scan - TAIR