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Mutant Lines
GT15316

GT15316

CSHL Arabidopsis genetrap mutant lines

Original: GT15316

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15316

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 18394618 [Map]; Strand: c
- AT2G44560.1 - [+] show detail - glycosyl hydrolase 9B11
  Distance: -911; Region: promoter
- AT2G44570.1 - [+] show detail - glycosyl hydrolase 9B12
  Distance: 0; Region: exon4 (CDS)

AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGTCA 
CCGGTTTAGG ATCATTTTTG ATTGACACTA TAGAGGCTCC TCTATGGTGT 
GGTCTTTTAG GATAATTGGT CCCGTATCCA ACCATGTAGC TCATTTTCTT 
GGGGTTTGAC CCAAGTATGT AGTCTACCTG TTACATAAAC CATGTAAATT 
GTTTTCTTCT TATGTTAATC ATTTTAGTCA TAAACCATGT AATCATCACA 
GAAAATCCTA AGAACTATGA AGATTACGAA CACTTTGCAT ATCTTTATAA 
GAATTAAGTC TTGAGGATTC TCAAAACGTA ATTTAATTTA AAAGGGAAAA 
ACACGAATGC CTGCCTAACC TGGGCACGAG CAAGGTTAAG AAGATCAGAA 
GCTTGAAGGA CATCACCATT GGGGCATTGA ATCGATGTTT GTGCAGCTTC 
GAGGTATTTT GCATAAGTGG CTAATGCGAA AGAAGCGGTG GCAGTGTACT 
GGAGGTTGTC CCACGGCAAG AACCAGAGCA AACCTCCTGG GGTCTTTTTA 
ACATTGTTGA AACCCTTTTG AGCACAGTTG CAGATGAATT GCTCTGCCAT 
ACTCTTGTAC TCAATCATCT TCCTTC

5 prime edge [+] show sequence

Chromosome: 2; Position: 18394557 [Map]; Strand: c
- AT2G44560.1 - [+] show detail - glycosyl hydrolase 9B11
  Distance: -850; Region: promoter
- AT2G44570.1 - [+] show detail - glycosyl hydrolase 9B12
  Distance: 0; Region: exon4 (CDS)

TTTCTCCCTG TCGGTAACTG TATTGGAGGG TTTGAAGCTT GGTACAACAA 
TCCAAAACCG AATCCTAATC TTTTGGTTGG AGCAATTGTG GGTGGACCGG 
ACGAGTACGA TGCATACGGA GATGAACGAT CTGATTTTCA GCACGGCGAG 
CCTGATACCG TCACGGTTGC TCCTTTGCTT GGTGTTCTGG CTGCCATTGC 
ATGACCTTAA GTATTATTTT CTTTGGACTA CATTTCCCAA GGACGCTCTA 
GCAACTAACG TTTTAGGTCT AAGGGTAGAG AAACAAAATT TGATTTGTTA 
AAATATCTTG ATTTAGTGAG ACATTTTGAA GACTGATGAG GTTTTTCCTC 
TGTTTCGAGA CTAAAGTGAT TTCGGCTCGG TTAAGTTATT TTGGTTTGTA 
GCATTGATTC TCTTGAAAAT TTT

AT2G44560.1

Model type: Protein coding
Short Description: glycosyl hydrolase 9B11
Computational Description: glycosyl hydrolase 9B11 (GH9B11); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B9 (TAIR:AT2G44540.1); Has 1847 Blast hits to 1833 proteins in 271 species: Archae - 2; Bacteria - 688; Metazoa - 179; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G44570.1

Model type: Protein coding
Short Description: glycosyl hydrolase 9B12
Computational Description: glycosyl hydrolase 9B12 (GH9B12); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B9 (TAIR:AT2G44540.1); Has 1880 Blast hits to 1860 proteins in 272 species: Archae - 2; Bacteria - 716; Metazoa - 181; Fungi - 17; Plants - 918; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link: InterPro Scan - TAIR