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GT15328

CSHL Arabidopsis genetrap mutant lines

Original: GT15328

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15328

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9660121 [Map]; Strand: w
      • AT3G26380.1 - [+] show detail - Melibiase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15328 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAT 
    TACGATAGCT TCTGATTTTG TTCTCCTCTT TTGTTGTTGA GAACCTGAGA 
    GTAAGAGAGA AGACAACACG CAATGGTTGT GTTATTGGCG GGTACTATTA 
    GAGAGCGTGA CTAGAATTCA GAATTGGATT AGTAACCGTT GAGCTAATTT 
    TCTTTTAATA ACAGTTTAGT GCATCAATTT GATCAAATTT AATATAAAGA 
    AAACTAGGAA CTTTACATAA TATCAAAATG ATTACAAAGA TGGTAAGTGA 
    AGACTTCAAA GATTTGAAAG GTCAAAAAAA GAAGAAGAAG AAGAAGAAGA 
    AGAAAACTAC GAATCTCTAT AGTTTGTTGC TCCTCATCAG ACAAAATCCA 
    AGACCAAACA AAAGCATAAT CATCAAGCTT TACACATGCA TGGAGTGAGA 
    GGATTTTCCC AAAGATCATA GTTAGGGAAA GTTTCTTCAG GTAAACCGGT 
    TCGTGTTTGA TGGGTTACAA CTACATCTTC CACAAAAGTT GCCCATCCCA 
    TGTAAGGATC CCCAAATGAT TTCGACATCA ACCCTTTATC CG

AT3G26380.1

Model type
Protein coding
Short Description
Melibiase family protein
Computational Description
Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Melibiase family protein (TAIR:AT3G56310.1); Has 1323 Blast hits to 1316 proteins in 313 species: Archae - 2; Bacteria - 513; Metazoa - 306; Fungi - 224; Plants - 205; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link
InterPro Scan - TAIR