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GT15331

CSHL Arabidopsis genetrap mutant lines

Original: GT15331

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15331

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13400925 [Map]; Strand: c
      • AT4G26542.1 - [+] show detail
        Distance: 3087; Region: intergenic
      • AT4G26550.1 - [+] show detail - Got1/Sft2-like vescicle transport protein family
        Distance: 1590; Region: intergenic
    Flanking Genome Sequence: GT15331 - 5-prime edge 
    CCTACTTTCT CCCTGCATTC TTGGACTGCT TCTGCCGCTA TATTCCCACC 
    ACAAGGGACC ATTCTTTTAT TATTAGACAA AACAAGTTAA ATCCGATTGA 
    AAAGTATACA GACAAAACCT TCTACTATAA AAATAAATAA CCCATATCAT 
    ATTCTAGATT AGATCCAGCG TAACACCCTT TATTAATTCT CACTTAATAT 
    AATTTATTGG AGCAGATCAA GCCATTCAAC AAAGCCTCTC TCTCATGTGA 
    TGAGATCTCT GACCTAATTG AATCGTGATT AGATCTAGAT CTTGTTACAT 
    TGTCTTCGTC AATTATCCGC ACTTAAACAT TTCTTCGTTA TTTTACACTA 
    TTAGTCTCCT CATCAGATTT CCATACGTTG TAACACATAT TTAATTCATC 
    TTTCTGTACT AATAAAGAGT ACCCACCCAT AAACTACTCT TTCATAAACA 
    AATGTCTTCA TCAACAAATG TCTTATATAA CGTGAAGTTT CATATCCAAA 
    CCACTGGTTA TAAAGTGTTT TGTAACGTTA ACTTTCACTA TTAGACTCAT 
    CAATGTTTGC CTATGTAATC ATACAACAGT AGTAGTTGTA TAAATTATAA 
    ATTGGTGTAG AGAATTTAGG AATAATGTTT GGATGAAAGG GTGTTGTCAC 
    CCAACAAGGA GAGGGACCAT TAATAACCGA TAATCATAAT AAGATTTGTG 
    AAAGAAATGT TTCACTGATT TGGCAGAAGT ACAGTTGGAG GTTCTTTGTC 
    TTTTCTCTTC TGCACCTTTT GTTCTCTTTA CTTCCTTCTT GTTTGGTTGG 
    TTTTTGTTCT TTTCTTATTT TTTTTCC

AT4G26542.1

Model type
Other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G26540
Link
InterPro Scan - TAIR

AT4G26550.1

Model type
Protein coding
Short Description
Got1/Sft2-like vescicle transport protein family
Computational Description
Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305), Vesicle transport protein, SFT2-like (InterPro:IPR011691); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G56020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR