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GT15334

CSHL Arabidopsis genetrap mutant lines

Original: GT15334

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15334

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10490389 [Map]; Strand: w
      • AT2G24660.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT15334 - 3-prime edge 
    GCTGAACCAG ATTCTGTTAT TAAACCGGAC GATTTCACTG AATCAAATTC 
    TGCTCTTCAA ACCGACTCTG TTTTCGAACC AGACTCTGAT TCCGACGTGG 
    CACCTGCTTC TATNTGCTTC CGATTTACAA AATTCACGAG TTGATTCATC 
    TGATTCATCG ACGCCGGATA AGAATCTTGC TTCTGGTGAT ACTTTGGCTC 
    AAATTGATGA TTCTCCTGAT ATTGTCTCAA CTCCTAATCG TAATAATCAG 
    CCATTGTCGT TGTTGACAGT CCGTTTGTTG AAGCTACGTC TCCTCGTCAA 
    AGAAAGCGTC AGATTAGACA GTCGGTTCGT CTGCAGGATT ACGTTCTTTA 
    CAATGCAACA GTCTCTCCAA TAAACCCCCA CGGCTCTTCC GATTCTT

AT2G24660.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.7e-166 P-value blast match to GB:BAA78424 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996363|dbj|BAA78424.1| polyprotein (AtRE2) (Arabidopsis thaliana) (Ty1_Copia-element)
Link
InterPro Scan - TAIR