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GT15351

CSHL Arabidopsis genetrap mutant lines

Original: GT15351

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15351

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4169864 [Map]; Strand: w
      • AT5G13130.2 - [+] show detail - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
        Distance: 0; Region: intron13 (CDS)
      • AT5G13130.1 - [+] show detail - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
        Distance: 0; Region: intron14 (CDS)
    Flanking Genome Sequence: GT15351 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAT 
    TCAAACGATG AAGATCATTA TCGCCAAAAA AAAACAAAGA CTAAGGTTGT 
    AAGAAAAAAA AAAAGGTTTA CTTGGCCCCC CAGCCGTTGT TTTTGGCCCC 
    GGCCCCCAAA AAAAAATTGG GGGGAACCCG GGTTCCCCTT TGGGAACCCG 
    GGTTCCAAAA AAACGGGCCC GGGTTCTTTG AAACCCCGGG AAAAAAAAAT 
    TTAACCCAAT TTTGCCCCGA AAAAAACTTT TTTTCCAAAC CCAAAAAAAC 
    CTCCAAAAGG AAAAAAACCC CTTACCCCCA CCCCAAAAAA ATTTCGGGTC 
    TACCCCCCCC AACCAAGGAA GGGGGGCCAA ACCCCCCCCC CGGGGTTCCC 
    CCCAATTTGG AGCGGGATTT TTTTAAAACC CCCAAATTTA AACCCCCTTT 
    GGGTTCCCAA AAAAAGTTTT TTTCCCCCCG GGGGGTTGGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4169922 [Map]; Strand: w
      • AT5G13130.2 - [+] show detail - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
        Distance: 0; Region: exon14 (CDS)
      • AT5G13130.1 - [+] show detail - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
        Distance: 0; Region: exon15 (CDS)
    Flanking Genome Sequence: GT15351 - 5-prime edge 
    CTTTCTCCCT GGTTTGATAT AATGAACCAG CTCCAGGAGT CAAAAGCTAA 
    GATCCAAAAC TTGGAAAAGG CGCAGAGGGA GAAAGAAGTG CTTGAGTTGC 
    AAGTAAAGAT TCTTTTATCT TACAAATTTC TCTTTTAGGT CATTTTTTGG 
    CAACATTTAA AAAATGTCGT TGTTTAAAAT GATGAACCCA GCTTAAGGAG 
    TCAAAAGCTA GGATCCAAAA CTTGGAAAAT CGGCAGGAGG GAGTAAGTAC 
    TATCTTTCAA CAAGAAAGAG CCCGCAGAGA TGTAACTGAG GATGGCTTAA 
    GGAAAAAACT ACGGGTTAGT CCTATTGTAA TTACCATATA GTGGAAATAT 
    CCCATTTTAT TTTAGACATA TCCACGCATA CTCAAATCAT TTGATAATGT 
    AACAGGAAGC TTCTGATGTC ATCGATGGGC TAAGGAAGCA AGTGGATACC 
    TTCAAAGGAA AACGCATTTT GTAAACACAG TTTCAAGATC AGTACTCTTT 
    TCTAGTTTGT TTT

AT5G13130.1

Model type
Protein coding
Short Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Computational Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G13130.2

Model type
Protein coding
Short Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Computational Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1).
Link
InterPro Scan - TAIR