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GT15354

CSHL Arabidopsis genetrap mutant lines

Original: GT15354

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15354

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 87966 [Map]; Strand: c
      • AT4G00210.1 - [+] show detail - LOB domain-containing protein 31
        Distance: -1071; Region: intergenic
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -2070; Region: intergenic
    Flanking Genome Sequence: GT15354 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACCCGC 
    AAGTACAACC TCAGACAGTC AGTTACTGTC ATGTCTCTCT TTCTCTCTGT 
    TTGACAAGAT CCCTGACCCT TGTTCACTTC CCTAATTTAA AGCCTTCTCC 
    TTAATGGGCC GGGCCTTGTA TCTGTTTCGG ATCCTTCTTT ATAGCGAAAT 
    GATTAATAGT AGTGATTACA CCTAAAATGT ACGTATATCA CAAAAAGAAT 
    AGTTTTTTTC TTCTGTCTCT CTTGTACTAT TAGGCCTAGT GAATGTATTA 
    AATACAAACA GTGTACATTA GCATACGCGA GCGGTGAAGA AAGGAGCACA 
    AGAGGGCGTG ATACGAGGAC ACGTGTCTCA TGTTAGTACA AACAAAGATT 
    GGACAAGAGC CGGACGGCAC GGTGACCTCT GTCAACAACT GTTACCGTTT 
    CTTCTAATCT ATTTGTTAAT CTCCTAAGTA ATGTAATTAA TTAGTTTTCA 
    CTGTTCATAA TTAATCAAGT AATAATAACA TAAGAAATGA AATGGGAGCG 
    TTACTTGTAT ACCATATGCA CTCTCAAACG AGCCATTGGT TGCGACAGAA 
    CGGTTACGTT CTTCATAAAA GTCACATTCG ACACATGGCG ATCATATATA 
    CGTGCCAATT TTTCCGGATC ACTCAAATCC AATCCCGGTT TCTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 87907 [Map]; Strand: c
      • AT4G00210.1 - [+] show detail - LOB domain-containing protein 31
        Distance: -1012; Region: intergenic
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -2129; Region: intergenic
    Flanking Genome Sequence: GT15354 - 5-prime edge 
    ACTTTCTCCC TGCTTGCGGG GGAAGCAACA GTGATCAGTG TCATGTCTGT 
    TTCTGACTAT ACGATTTGTA GAAACAAGAA GCAACATACA TCTCGATTTT 
    CTCTCTATAA TTCTATCACG AAAGCTGTCC ATAGAGAACT AGTTTGACAA 
    AAAATTATAT ACAGTATATA ACATATATAA AAGAATTACA CACGTGTGGT 
    GAGGGATCGC ACGTGTGTGT GACAGGGAAA CCTGCGGCTG AGTGGTGAGA 
    GAGAAATACG TCAGCAAGCA GCTAATTGTG TTTTGCTTCA CGCAAAGCAT 
    TTGTGTTTGT TTGTCCTTTG TATATATCAC AAATCTGCTC TGCCGTTGCT 
    TCCAAGCTTT ACTCATTCTA ATTAGTACTA GTACATTCAT TCTCATTACT 
    ATAATAATTC ATAATCCCCA CCACTTGATC CCTCGTTATA ATCCGATTTT 
    AGTACCTTGT TAACTGAACC CACCAGCCTA TATATATCTT CATTACTCAC 
    TATCTAAAAT TCTAAATCCT TACTTGTTCA CTACTTTCTA GGCCTTGCTT 
    GTGTGATAGA CTGATAGTTA GTTCTAGATT CTCAGTGGCA TATACAAAAT 
    CTTTTTATGT CTTAAACCTA TGATTGCTAA TTTAGATGAT ATATATTGTT 
    GATTTGTCTA CTTTTCAATT TACAAGTATA TGTTATCCCT CCTTGTGTTA 
    TATGCTTTCA TTGATTTTAG GATTCCATAA ATAGATAATT CTTTCACTTG 
    TTTGAAAATA GCTTGTTTCT TGAGTGTGTG ATTCAACTAT GTACAGAAAA 
    G

AT4G00210.1

Model type
Protein coding
Short Description
LOB domain-containing protein 31
Computational Description
LOB domain-containing protein 31 (LBD31); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 19 (TAIR:AT2G45410.1); Has 416 Blast hits to 414 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 416; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00220.1

Model type
Protein coding
Short Description
Lateral organ boundaries (LOB) domain family protein
Curator Summary
Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.
Computational Description
JAGGED LATERAL ORGANS (JLO); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 18 (TAIR:AT2G45420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR