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GT15370

CSHL Arabidopsis genetrap mutant lines

Original: GT15370

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15370

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12179491 [Map]; Strand: c
      • AT4G23290.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 21
        Distance: 0; Region: intron3 (CDS)
      • AT4G23290.2 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 21
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT15370 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATCTGAG AAGAAACAGA 
    GACATAACAA AAGTGTTGGA AATAATTTTA CCCTAAAATG TTGTTCTGAG
    ATAATGTCGT TCTAGCAAAC CATTGAAAAC TCACTTTCAC TTGCAAATGA
    TTGGTAAGCT TTTCTCCTCC TAGAAACAGC GTATCCAAGA GCAAGCAGTA
    CAGTGCTCAC GACGACGGAA ACAACCGCAA TTGCCACAAT AGATCCTGTA
    GATATATTTT TGCCATCTGC GCGAAAGCTG TCACTCAGAA TACAATCCAA
    ATTGGTTTAA GGGCATAAAG TATTTTAAAT GCGAATTTTT TTAGAAACTT
    CTTTTAAATT TTTTGAATAT GAAACAATTT TTTTTTGTGA AACGAATATG
    AAACATTATT ACACAAAAAT AACAGGAGGT TGTGTTTTCT TTTTGAGTTT
    GTATTTTCAA GTAAACAAAA ATAAATGCAA ACACATCAGC AAAAATCGAG
    ATCCAACACA GCAGAAAAAG TTCAAATGAA GAGTTCATAT CTTTATATTA
    TATACCTTTC TTGGTTGTGT TAGAGTGACC ATTATCTAAT TCAGAAGGGG
    GAGTTGGTAA CATCCCATTT ATGAATAGTC CCAAGAATGG CTGTAGATCC
    CATCGCATGA AACAGCTGGT CCTTGCAATA TAGCCTACTT GTATCCCCCG
    GCAGCATGAC CTATTATCTA TCCTAAGATG TTGTAAACAT TTCTCGCAGT
    TCAAC

AT4G23290.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 21
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (CRK21); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 30 (TAIR:AT4G11460.1); Has 118335 Blast hits to 116928 proteins in 4420 species: Archae - 92; Bacteria - 13445; Metazoa - 43452; Fungi - 10162; Plants - 33529; Viruses - 391; Other Eukaryotes - 17264 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23290.2

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 21
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (CRK21); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 30 (TAIR:AT4G11460.1); Has 118308 Blast hits to 116879 proteins in 4391 species: Archae - 92; Bacteria - 13400; Metazoa - 43403; Fungi - 10140; Plants - 33618; Viruses - 391; Other Eukaryotes - 17264 (source: NCBI BLink).
Link
InterPro Scan - TAIR