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GT15392

CSHL Arabidopsis genetrap mutant lines

Original: GT15392

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15392

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3015369 [Map]; Strand: c
      • AT5G09720.1 - [+] show detail - Magnesium transporter CorA-like family protein
        Distance: -970; Region: promoter
      • AT5G09730.1 - [+] show detail - beta-xylosidase 3
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT15392 - 5-prime edge 
    CCTACTTTCT CCCTGCTCAC GAGTCATGAT TGTCGCCGTC GTCTCTTTGA 
    TAAAGGCAAA AATTGAGGAA CCCTAATAAA AAAATGGAGC GCACTACGAG 
    AACGTCGTCG AGGGAGAATC AAATTTCGAG ATTCAATTGA ATGTAAAGAA 
    CGCCGGAGAC AGAGAGGGGA GAAATAAAAT GAGTTAGCAA TTTAAAATGT 
    AAAGAAAAAA ATGGTGGTTC AAGCTGAGTA CGAGCCAGCG GACCATAGTG 
    GATTTGTGTG GCGTCGAACC GTTGTCCGTC CACTGCTGAG AGCGGGAGGT 
    AGTCGCTGCT CTGTGAAGCC AGCCTAACGC AATACCCTCA ACCTTTAGCA 
    ACCGTACGGA CCAAACCTTC GATTGGTTCG TATGGTTCAC TCACAGCTTG 
    GACTGGGCGG TCTAGAACTA TGCCAACAAC AAATCCGACC CGTGGGCCGA 
    TCCAGTGTTC CACCATCTTA CAGTCCCCAC TTGGGTTACA AGCTCTCGTT 
    ACATAGCTCG ACGTTAAGAA GTTGATTTAA TGAGATATAT AAACAAGACA 
    AATTATGAGT AGAGGAACCG ATGTGGGATA TTNGGAGAAG TTTCATTGTC 
    CCACGATTAG ATAAATTATC GACCAAAACT TATATGTAGA TAATTACATT 
    TTAACATTGA TCCCNAAAAA AAGAAGAAGA TAATTACATT TTTCTTATTA 
    GACATATCAG TTTTTTGGTA ATTGTGAAGG ATGCTTTGAC TCCATCAAAC 
    CCTCATACAA AAAATCTTTG TAAGTCAAAG ATTTAATGAT GAAAATTAAC 
    CCAA

AT5G09720.1

Model type
Protein coding
Short Description
Magnesium transporter CorA-like family protein
Computational Description
Magnesium transporter CorA-like family protein; BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.3); Has 601 Blast hits to 596 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 173; Plants - 356; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G09730.1

Model type
Protein coding
Short Description
beta-xylosidase 3
Curator Summary
encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.
Computational Description
beta-xylosidase 3 (BXL3); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-D-xylosidase 4 (TAIR:AT5G64570.1); Has 9260 Blast hits to 8072 proteins in 1198 species: Archae - 63; Bacteria - 5600; Metazoa - 16; Fungi - 1569; Plants - 515; Viruses - 0; Other Eukaryotes - 1497 (source: NCBI BLink).
Link
InterPro Scan - TAIR