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GT15417

CSHL Arabidopsis genetrap mutant lines

Original: GT15417

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15417

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26389872 [Map]; Strand: w
      • AT5G65970.1 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15417 - 3-prime edge
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCAAGACAAG 
    ACCCACCGCA GACGTCTAGC TGCTGCTACG ACCTCTTCCC GCTGCGATGA
    GGTCATCTCT AGCTTCCCTT GTACTAAAAA ATTTACGCTC TAGCTCTATC
    TCTCTAACAC TTTTTTGTTG TCCGCAGGGT CATGAACCAC TCATACCTGC
    CACGGGTTTG CACCAGCTAC ACATTCTATT GTTCTTCATG GCTGCC
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26389939 [Map]; Strand: w
      • AT5G65970.1 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15417 - 5-prime edge
    TTTCTCGCTT GTCTTGGTCA TGAGTAGAAG GAGCTGGACA AGGTAACATA 
    GAGGCTGCAG CCTTTTCAGG AATATAAATC TTGAGAATGT ACTGCTCTCC
    GAAGGTTAGC AACAAGGAAA TGAATCCTAG AATCATCAGC TCTGCATCCA
    TTTCATATAT CTTAGTTTTT TTAACCAAAT ACGGTAGGAG AAAACAATTC
    TCTGGTCTTA CCGGCCTTTA TTTTTTCCAA GGCTTCAAGC AGAGAGTTCT
    TATGTTTCTC CCACAACCAC TGAGAAAGAG ACAAATAAAT TTTAGAGGCG
    GGGGATACAC ATGCGGAAGA AAGAAAAAAG GTAATTCAGG GCAAACCGTG
    GCAACTCTGT GAAGAGCCTT CTCGAGAAGG ACGGAGACAA GAATGAAAAA
    GGTACAGACG AGGGCAACGG CCCAGGTGGG AGTTTGGGAG AGTCCTTTCT
    CTTTGGCGCC GCCTGCAGAG GAAGCTCGGG CAAAGCCGGT AAGCAGCTGA
    GAGCAGAAGA GCAAAGTGGT CCAACACCAA AAGCATCTTG TGGCCATGGT
    AGCCAAAAGA ACAAAATCCC TTGGTCCTTG ATTACGTACG TGAAACAATG
    AAGAGGGCAA ATAAATGCGG TGTTGACTTG AAAGTCCGTT TACTGTGATA
    TGTAATGCAT AACAATAAAT TATGGGAAGA GAATCAATCG TCAATGTTTG
    TTTGACACTG GAGGTACTTG A

AT5G65970.1

Model type
Protein coding
Short Description
Seven transmembrane MLO family protein
Curator Summary
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s
Computational Description
MILDEW RESISTANCE LOCUS O 10 (MLO10); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G17430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR