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Mutant Lines
GT15422

GT15422

CSHL Arabidopsis genetrap mutant lines

Original: GT15422

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15422

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 5; Position: 23505270 [Map]; Strand: c
- AT5G58080.1 - [+] show detail - response regulator 18
  Distance: -1127; Region: intergenic
- AT5G58090.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
  Distance: 96; Region: intergenic

TGAAACGGTA GAGGATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAA 
CTATAGATGT CTAAAACAAC AAAAGGACAG TCTCTCCAGC ATTTATGAAA 
CAGAGCTTCA GGGAGAAAGA GAGCGCAATA GACTTTCCCA ACTACTATAG 
TACAAATTCA AATGCTCATT TGGGCCTGAT TTATTGAACA TGGCAATATG 
GCATTGTTTT AAGGTCAGTT TGGTCCCAGA AAACAGCTCT AATAATCACT 
TGGTCTAAGG AAGAGAAATC AGAATTCAAG AAGAAAAAAA AATAGTTCAG 
GCCATCACAC AGAATTACAA ATTGACAAGA AGAAACCATC AAAAAATAGA 
GACTGCGATG GCTGCCACCA TCAGTAGTGG GAAAAAGAAC CCGTGTTCCC 
GGGCTGCCCC ACCGTAGTAA GGTTCTATCA TAATCGGAAA TCTGCAAGTT 
CCAGTAGATG GATCTGTCTT GGTCACCTCT GATATGTTTG GGAACTTACA 
AGCTGTATCA AGCTGATCCT GAATCTGATA ATAACTGTTG AATGCATACG 
ATATGTTTTG TTTCCCGTCA AGATTAGCAC AGGACGTCCC AACCCCAAGA 
CTAGTACAGT CCCCAAGGCT ACACGCGTAG CTCACGGCTG GAGCTACCTG 
CGG

5 prime edge [+] show sequence

Chromosome: 4; Position: 7880772 [Map]; Strand: w
- AT4G13560.1 - [+] show detail - Late embryogenesis abundant protein (LEA) family protein
  Distance: -389; Region: promoter

ATTTTTTATC GGCAATAATC ACAATTTAAA ACTTCAAAGT CACTTTTATA 
GTCAGTAATT TTTTTGTATA GATCGACTAA TAAAGAAATT AAAGAAAAAA 
GGATAATTGG TAGGATGGAA TTAATGACCA AACTTCAACC TTTTGATTTC 
GTAGTTATGA TACAAGCCAA CTCGACATTG ATTTTTTATT CTAAAGTAAA 
TGGATGACTA AACGTTTATT ATATCACAAA CATGAGTTTA CCCTATTTTA 
TTCCAAGATG AGTTTGGCTA CAAGATATTC TTCAGTTTTG GTTCGAGCAC 
ACTTAATGTT ATTCTTCGCT TTTCATCTNC ACTCAACTAT TGTAGATATT 
ATCTTTGTTG AGTAATAAAT ATAGCATTAC CAAAAAATAG CAACACGAAA 
ATAAAATATA ATGTTGAAAT ATAGTCACTG CTGTAATATA GTGTCATTTG 
AAAAAGATTG TGTGTCGTGG ATAGCAAGTT TCGAACCTTG TTTAGGAGAG 
TTTCGGCCAC GCTTAGAAAA AAAACATATA ACAAAATATT TTCTTT

AT4G13560.1

Model type: Protein coding
Short Description: Late embryogenesis abundant protein (LEA) family protein
Computational Description: unfertilized embryo sac 15 (UNE15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: double fertilization forming a zygote and endosperm, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT1G52690.2); Has 494 Blast hits to 336 proteins in 72 species: Archae - 0; Bacteria - 40; Metazoa - 37; Fungi - 6; Plants - 401; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G58080.1

Model type: Protein coding
Short Description: response regulator 18
Curator Summary: member of Response Regulator: B- Type
Computational Description: response regulator 18 (RR18); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 12 (TAIR:AT2G25180.1); Has 83273 Blast hits to 82938 proteins in 2948 species: Archae - 359; Bacteria - 74242; Metazoa - 38; Fungi - 293; Plants - 2583; Viruses - 2; Other Eukaryotes - 5756 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G58090.1

Model type: Protein coding
Short Description: O-Glycosyl hydrolases family 17 protein
Computational Description: O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR