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GT15433

CSHL Arabidopsis genetrap mutant lines

Original: GT15433

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15433

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26389873 [Map]; Strand: w
      • AT5G65970.1 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15433 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCAAGACAA 
    GACCCACCGC AGACGTCTAG CTGCTGCTAC GACCTCTTCC CGCTGCGATG
    AGGTCATCTC TAGCTTCCCT TGTACTAAAA AATTTACGCT CTAGCTCTAT
    CTCTCTAACA CTTTTTTGTT GTCCGCAGGG TCATGAACCA CTCATACCTG
    CCACGGGTTT GCACCAGCTA CACATTCTAT TGTTCTTCAT GGCTGCCTTT
    CATATCCTCT ACAGTTTCAT CACCATGATG CTTGGCAGAC TCAAGGTACG
    ACAAGCCCTG ATTTTCTTAT CTCAAACTTT CGAAATCCTA GCTATTCATC
    ATTTTCTGAA ACTGCAGATC CGTGGCTGGA AAAAGTGGGA GCAGGAGACA
    TGTTCTCATG ATTACGAGTT TTCAATCGGT AGGCGAGTTC TTATTCATTA
    AATTAAACCT TTGTTTTATA GGTTACTAAA GTGGCTCCTC TCTATGCATA
    GATCCATCAA GATTCAGACT CACTCATGAG ACGTCCTTTG TTAGACAACA
    TTCCAGTTTC TGGACAAAAA TCCCCTTCTT CTTTTATGCT GAGAGAAGCA
    TGCATTTACT TCTTCTTGAG CATGCCCTCG TGGCATCAAG TTTGTTGATT
    AAAAATTGAT TTTTGCTCGC TCTCTCAACC ATCTGATTTA CAGGGGTGCT
    TCCTACAGCA GTTTTTCCGA TCTGTCGGGA GGATTGACTA CTTAACTCTG
    CGCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7900790 [Map]; Strand: c
      • AT1G22370.2 - [+] show detail - UDP-glucosyl transferase 85A5
        Distance: -911; Region: promoter
      • AT1G22380.1 - [+] show detail - UDP-glucosyl transferase 85A3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15433 - 5-prime edge
    CTTTCTCCCT GATTGCGGGT GGAATTCGAC GTTAGAAAGT CTTTCATGCG 
    GAGTTCCAAT GGTATGTTGG CCATTTTTTG CCGAGCAACA AACAAATTGT
    AAGTTTTCTT GTGATGAATG GGAGGTTGGT ATTGAGATCG GTGGAGATGT
    CAAGAGGGGA GAGGTTGAGG CGGTGGTTAG AGAGCTCATG GATGGAGAGA
    AAGGAAAGAA AATGAGAGAG AAGGCTGTAG AGTGGCGGCG CTTGGCCGAG
    AAAGCTACAA AGCTTCCGTG TGGGTCGTCG GTGATAAATT TTGAGACGAT
    TGTCAACAAG GTTCTCTTGG GAAAGATCCC TAACACGTAA GATTAATTGA
    AAACGTAAGA TTGTCATAAA AGTGTGGTAT ACATATAATA ATCAATAAGT
    AGTTGCTTTT ACTATTTTCA CTTTTCACTA TGTGTAATAA TACCCTGGAT
    TAGTAAAATG GATTGAGATA TTGGTAAAGG AAAGTGTATG CTAAGCATTA
    TCGGAAGATC CCTTAATAAG GACCGCATAA ACTATATTTC ATAATAAATT
    TCCTATTAAC ATAAAAGAAA TCTAAATACA AAAACCATAG ACTTTATTTA
    AAAAATTTGG AAGAAAAATA ATAATCAAGA ACTAGATATT TATAACACTA
    TCTAAACTCT ATCACACCCT AAGAAACATC GTTTTCACGA ATTATTGCCT
    TTAGGACCAC TAGTCTGGCC TTTATTAGGT GACCAACGTC AAGTAGATAA
    ACATTTATCT TCTGCTGGCA GTACATCAAT TATACAA

AT1G22370.2

Model type
Protein coding
Short Description
UDP-glucosyl transferase 85A5
Computational Description
UDP-glucosyl transferase 85A5 (UGT85A5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22380.1

Model type
Protein coding
Short Description
UDP-glucosyl transferase 85A3
Curator Summary
Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.
Computational Description
UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65970.1

Model type
Protein coding
Short Description
Seven transmembrane MLO family protein
Curator Summary
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s
Computational Description
MILDEW RESISTANCE LOCUS O 10 (MLO10); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT2G17430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR