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GT15445

CSHL Arabidopsis genetrap mutant lines

Original: GT15445

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15445

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19571220 [Map]; Strand: w
      • AT2G47790.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: GT15445 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAAAGATGG 
    GCGACTATGT TGCTGGAAGT CGGATGAGGA TGCTACCGAG ATTAACCGGT 
    CTTGGACTTC AAGTGAGTTG GTTGTTAAGC CGCCAAGGAA CCGCAAGAAA 
    AACAGACACT CTCCTTACTA GTAAACAGAT ACTACTTTTT GGGTCTTGTG 
    TCTTTTATAA AAGTTGAGAC TGAAGAGGAC AGTTTCCTTT ATGTCTCTTG 
    TTCTTGTTAT TATTAAAAGG CAAAGTTGTT TAAATGAAAT ATTGAAGAAA 
    GATTACATCT CTTGGGATAG CAAATTGCAG AAAGGAAAGA AAAACAGAGT 
    ACATACAGTA TATATACTCT ATAGAAGAAG GAATCTTTGG CTTCAGAAGA 
    GTAAATAGTC AATCAGCTCG ACACTGATCT TGTTCCAAAA TATCAGAGAT 
    CTTCTCAATA GGAATCATGG GCAGATACTC TGCCCCAAAG TAGTCTCTGT 
    CGCCAACGTA ACGAACCGCA TCGTTGTACT TCTCTGACCA GTAAAACGCC 
    GTGGGGATCA CTAAATGCGC AACTTCAGGG AACAACGGCA GTTGATTCAG 
    TAAACGCCAC AGCGTCGCTG CGTAATACTC TGCCGCTGGC TCGTACTTGT 
    CCCGGACGCT TCTTGCAATG CTCTTGGTAG TGTCCACAAC GCCGGTGCGC 
    TGCACCTCCG TGGCCACCGT GAGCGCTTGG CTAGAAGCTT GCTTCACCAA 
    TGACGGAACA TATGTCTCAA CAT

AT2G47790.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 11741 Blast hits to 7668 proteins in 457 species: Archae - 10; Bacteria - 2663; Metazoa - 3454; Fungi - 3073; Plants - 916; Viruses - 0; Other Eukaryotes - 1625 (source: NCBI BLink).
Link
InterPro Scan - TAIR