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Mutant Lines
GT15447

GT15447

CSHL Arabidopsis genetrap mutant lines

Original: GT15447

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15447

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 13346588 [Map]; Strand: c
- AT4G26400.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon1 (5UTR)
- AT4G26400.2 - [+] show detail - RING/U-box superfamily protein
  Distance: -14; Region: promoter
- AT4G26410.1 - [+] show detail - Uncharacterised conserved protein UCP022280
  Distance: -66; Region: promoter

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATTCGC 
AGACCCAATC TTAAAGCCCA TTAACCGCAA ACTGATATAT AAAGGAGCCG 
GGTCTATCTT AACCATTTAA AACCAACTTC TAATTTGGAA TCAAATTGAA 
CCGAATCGAA CCGGTTGAAG TTGAAAGAAG GAGAAAAGGC GTTGTCTCCG 
TGCGAGAAAG GCAAATCGGA GACGATGAGC GAAACCGAAG CAACCGGCGT 
TACCGATGAT TCGGCTCCAG CGATTGAGAC TGAAACTGTT TCTGATGCGA 
TGGAGCATAC AGCGATCGGA GTGGTTGAAT CGGTGGAAGG AGCCATAGAA 
GGAGCAGAGA AATGGGTGGG TGATTTGCAA CGGACGGTGA AGGAATCGAA 
GGATACCGCA ATGCGTTCTG CTCGTTCCCT CCGTGAAAAT TCTACCTCTC 
AGTTCCGCTC TATACAGGTT AGTTAATCTC TCTTTTGTTC ACCAAACAAT 
TTTTGCGAAT CGAGATTGTT TACCAAAAAA CATTTTCAGG ATTTCAAACC 
ATGGATATGG TGGAATTTAG TATCTCGTAA GCTATAATTT CTAGAAATGA 
GCTCGATTCA GAACAGATAT TTCTCCAATT AGCAGTTTTA TGTATTGAAT 
GGTGCTAGTT TTTGTTCATA TGGGTAAAAT CTTGTTGAAT CATACCATTA 
TAACTTATTG GCAATGATCT TAGTCTCTTC CTGGGTTCTG ATTCTGCTTC 
AAATGGTTGT TTAGAAGACT GTAATGTATC GCTGAGGCAT TCTTGATTAT 
TCTCTAAACA ATGTTTTTAT ATGATATCAG ATATTCATGT AGCTTAATGA 
T

AT4G26400.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G26400.2

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G26410.1

Model type: Protein coding
Short Description: Uncharacterised conserved protein UCP022280
Computational Description: Uncharacterised conserved protein UCP022280; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP022280 (TAIR:AT2G45060.1); Has 79 Blast hits to 79 proteins in 22 species: Archae - 3; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 72; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR