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GT15470

CSHL Arabidopsis genetrap mutant lines

Original: GT15470

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15470

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23226070 [Map]; Strand: c
      • AT1G62710.1 - [+] show detail - beta vacuolar processing enzyme
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT15470 - 3-prime edge 
    ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATTTG GACCAAAACA 
    TAGGTCACAT CTAGAACATT GATATTACTT AAGAGAAGAA TCCAAACCTA 
    GATACAGACT TATTGGTCGG ATTAAGGGTA AATTAGTTCA TGCATAATTA 
    TGAGGAAAGC TAGATAAATA AATATACCTT AGGGACTCCG GCGTAAACAT 
    CGTCACCGTC AGGATGGTTG ATGAGAGTAC CCGGACGAGG ATTAAGTGGG 
    TGGTTTGCGA TATCATCATA CATCAAAACG ACTATGTTTT CTTCCTTTAA 
    ACCTCCTTTT CTTAGTATTT GATATGCGTG ACACACGTCA GCCTTTAACA 
    CAAAGCAACA AAACACTTTT AATAGATATC GAATTTATAA AAACTTTTGA 
    ACTTTTTCTT AAATGACAAC TAGATTGAGA AATGGAGAAA TTCACCATAC 
    ATAGGATCTT AGTCTTGAAT TAATTTCATA TTTTGAAGAA AATAATTAAA 
    CAAAATTTTG CATGTCACAT TAATATCTAA GCCAAAAAAA AAGAATCTTA 
    AGGCAAAGTA TATATTTACA ATAACGGATT GCTATTAAAT TTGAATCACG 
    AATAATATAA TCAATTCGTT GGACACTATG TGTACCTGGT GTCTGTAGTT 
    TCCATATCCA GAAGAACCAG CGACGAGAAC CGCCCATCTT GTACCGACAC 
    CATCTTCGTC TTGGTCAGCC GGGTTAGCTT CCTCTGTCGG CATAAGAATC 
    TTTGG

AT1G62710.1

Model type
Protein coding
Short Description
beta vacuolar processing enzyme
Curator Summary
Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.
Computational Description
beta vacuolar processing enzyme (BETA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 785 Blast hits to 783 proteins in 241 species: Archae - 4; Bacteria - 10; Metazoa - 274; Fungi - 115; Plants - 253; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Link
InterPro Scan - TAIR