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GT15482

CSHL Arabidopsis genetrap mutant lines

Original: GT15482

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15482

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15470258 [Map]; Strand: w
      • AT2G36850.1 - [+] show detail - glucan synthase-like 8
        Distance: -369; Region: promoter
      • AT2G36860.1 - [+] show detail - pre-tRNA
        Distance: -13; Region: promoter
    Flanking Genome Sequence: GT15482 - 3-prime edge 
    TAGAGGTATC TTACCGACCG TTACCGACCG TTTTCATCCC TAGATAAACA 
    AAGAAACTGT CAGTACCGAC CTTAGCTCAG TTGGTAGAGC GGAAGACTGT 
    AGTAGTAGCT GTAATCTTTA GGTCGCTGGT TCGATTCCGG CAGGTCGGAT 
    TTTAAGTTTT TAAATTTCCA TTTTTTGTTT TTCTATACAA ATCTTGATCT 
    TGGGCCTGCC TATTCGTTCA TGGGCCGATA ATTCAAAATT TAAAAGTAAG 
    ATAACGCGGT TTCGCTAACA TGAACACGAC GACGTTTTAG TATTGAATCC 
    GTGTTTTGAC ACGACAGTTA TATTACATAG TTGGAAGGAA CGGCTCGAAA 
    CGGGAAGGTT ATTTTGTAAT TTTCAACTTT TTCTTTTTTT TTTCCAAATC 
    CACTTTTCAT TTTATTTTCT TAGAGAAAAC CCCCTTTACG AAGGAATCAA 
    ATCGACTCGT TTTCTAAAAT CCGCCATAGA TCCCATCCAA CACACCACCG 
    TCACATCCGG GTTCGAATCC TCCAGCTCGA GCTATTCGCG TTTCTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 404949 [Map]; Strand: c
      • AT4G00940.1 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: -139; Region: promoter
    Flanking Genome Sequence: GT15482 - 5-prime edge 
    CCTACTTTCT CCCTGACTGT AATTTTTATT TGCCTCGAAT GAAAATATGA 
    ATATAGTATG CTAAATATCA ACTACTATAG TTATGGTGAT GATGATGATG 
    ATGATGATGA TAAAACCACC TACACTATTA AGAAAAGAGA GAATTAAAAG 
    ATAGTCAAAA CAAACACACC ACTAAAAATG CCCATAAAAG TGAAACCCAA 
    CACACTTCTA AACTTTAGCC TCAAAATATT CATCTCACTC GA

AT2G36850.1

Model type
Protein coding
Short Description
glucan synthase-like 8
Curator Summary
Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).
Computational Description
glucan synthase-like 8 (GSL8); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: microsporogenesis, 1,3-beta-glucan biosynthetic process, pollen development, developmental growth; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 10 (TAIR:AT3G07160.1); Has 1219 Blast hits to 893 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 675; Plants - 477; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36860.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Tyr (anticodon: GTA)
Link
InterPro Scan - TAIR

AT4G00940.1

Model type
Protein coding
Short Description
Dof-type zinc finger DNA-binding family protein
Computational Description
Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR