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GT15497

CSHL Arabidopsis genetrap mutant lines

Original: GT15497

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15497

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 11094827 [Map]; Strand: w
      • AT2G26030.3 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -1659; Region: intergenic
      • AT2G26040.1 - [+] show detail - PYR1-like 2
        Distance: 5; Region: intergenic
    Flanking Genome Sequence: GT15497 - 3-prime edge 
    CCGACCGTTA CCGACCGTTT TCATCCCTAT ATGCATGATG ATGAATAATT 
    TCAAGTTTAT TTCTTATATT TTCTCTCGGT AAGTTTTTTC CTTTCTTCTG 
    ATGAATATTG ATTATTTACT TAATTTGTGA GATTTACTAT TGGAAGCAAA 
    TGTTTAATTC GATTCCGTTA ACGAAACTAT TGTTGCATAA CGCATATTAG 
    TTCTCTGTTT ATTTTTTTCC AATAAACGGC AAATCACGAA TTCTGTCATT 
    TGATTTTGCT TTTTCCACCA TCTATTTTTG AATAAATTTG GACTATTTTT 
    GAATAAACTT TGGACTATTT TTGATGATGT CAAAAATTGG TATTACACTC 
    TTAATTAATA TTGGTTATAG TTGGTCTATA GTATTTGCGC TACAAAGAGT 
    CAAGAAATCT TGCCGGTTAT CAAAAAGCAA AAAGGAACTT AGAAATCACT 
    TCATCTCCAC TCGA

AT2G26030.3

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), FBD-like (InterPro:IPR006566), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G44950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G26040.1

Model type
Protein coding
Short Description
PYR1-like 2
Curator Summary
Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.
Computational Description
PYR1-like 2 (PYL2); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 3 (TAIR:AT1G73000.1); Has 445 Blast hits to 441 proteins in 38 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR