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GT15506

CSHL Arabidopsis genetrap mutant lines

Original: GT15506

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15506

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7831843 [Map]; Strand: c
      • AT2G18000.2 - [+] show detail - TBP-associated factor 14
        Distance: 1263; Region: intergenic
      • AT2G18010.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -2059; Region: intergenic
    Flanking Genome Sequence: GT15506 - 5-prime edge 
    TGGAGATGAA CTTATCTCGG CGCTTGTTTC ATCTTTCTAG GATATTATTG 
    GCTTAGTTAC TAGCTACAAC TTTGACTTTT AAGAACAAAA CAATGTAGAA 
    AGTGTATTAT TTTTAGAATT TAACCAAAAA CAAATAAGAA ATTTGACCCA 
    AAAAAATGAA AATGTGAGTA AAGAAAAGTC AAAAAGATGA GTTGTGTGGG 
    ATCAAAGAGT GGGGACAGTG AGATGATGGT GACAGATGGC TGAATTTAAT 
    TGGCACACCT GTTGTGGTTA TAACTCGCAG ACACTATCAA TTCATTCTTT 
    AGTTGACATC AACCGAAAGC CCCAACACCT TCTTCTATTA AAGTTTAAGA 
    TAAATCTTGA TTTTAAAAAC AACTTTTCTT TGTTTATACA ATTTATAATT 
    CTCACAAAAA CAAAATTGAT AAAGATGAAG CCGAAAGAAG ACCCGGAATT 
    AGAAAAAATA AGAGGCAAGA GGGTAAAGTG TGAAGGGTCC ATTGTCTTGA 
    AATCACAAGA CTCACCCTTG TG

AT2G18000.2

Model type
Protein coding
Short Description
TBP-associated factor 14
Computational Description
TBP-associated factor 14 (TAF14); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: YEATS (InterPro:IPR005033); BEST Arabidopsis thaliana protein match is: YEATS family protein (TAIR:AT5G45600.2).
Link
InterPro Scan - TAIR

AT2G18010.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G36110.1); Has 1342 Blast hits to 1327 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR