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Mutant Lines
GT15523

GT15523

CSHL Arabidopsis genetrap mutant lines

Original: GT15523

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15523

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 9546888 [Map]; Strand: c
- AT4G16960.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: intron5 (CDS)

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACCTTT 
GGATATAGAG TATTATTCAA CTGCCGGATC TTGAAGGAAC ACAAAACCAG 
ATGATCCGTC TTACACATCA GTGTCATATT AGTAGCTATT GTATGGATAT 
AACGTCCGCC TTTGTATTGG AAGTATACTT TCTCTCTCCC ATAAGGAGGC 
TGGTTTGAGG CTCACCCGCT ATCACAACCT TTGGGTCGCA AGAATTTGTG 
AGAGAGAGAT CTCCGAGGAA AAGTGATATT CACGGAATTT CCATACGCTA 
GATGCTTGAA ATATGCTCGC ACTTCACCTC TTGGTAAACA CCATAGTCTT 
TTTGAACACA TGAACGTGGG ATGAG

5 prime edge [+] show sequence

Chromosome: 4; Position: 9546831 [Map]; Strand: c
- AT4G16960.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: intron5 (CDS)

CCTACTTTCT CCCTGTCCAA GGTATACGTC TTGGATAATG TTTAATTTTA 
GTTTAACGTG AGCAGGATCT AAGGATGCGC CGTACCACTC CTGTCATGTG 
TCTCCATATG CGAATGATAG TGATGGAAGC TCTAAAGCAG AGTACAACCA 
ACAGTCTGGG GAAAAATGTG ATGCTGTAGA GAATGAGAGT AGTAGCAAGA 
AGCGGATGCG AGTAAGCCTT TTGCCATAAT TTGAACTGAA AACTATTAAA 
GCTATCTCTC GATTTTCTTT TTAATATTTC AGGAAGGCCA CTATCTAAAA 
GAATCGATAG TTTGGTTTAT TATACAGATG TCATTAGGAA ACTCTGAAGA 
AGATTTCAAC TTACCCTGTG GCCAAACAGT AACAGACACA GGATTGACCG 
CTCCAAATCT GGAGCTTCCA TTAGGGCGGG GAGAATCGTC ATCAATTTCA 
TATCCATGTC TGGAGGGTGA AGCTTTCTCT GTTGATTCCA TGATAACTAA 
GCAACAAGCT AAAGAAATTC CCATCGCATA GGGACGAAGA TTCTGAGGCA 
TCATGGTAAC TGAAACATCT TACTATTCTG TTTTGTTTTG TTGCAGCATA 
ACAAGAGAAG CAATCTTTAT TGATCTATCA AATAACCTGA ATTACAATGA 
AGAGAACTGC AGAGTTTCAG GCTCTGAAAC ACACCAATTC AATGATTGGA 
TAATCAATCT CTCACAGAAT TAGAGACTCT CTATATATAT ACTTTAAAGA 
CTCTCAACAT TTAGTCATAA TGTTGACTCT TTGA

AT4G16960.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G16940.1); Has 19980 Blast hits to 13439 proteins in 492 species: Archae - 4; Bacteria - 689; Metazoa - 980; Fungi - 44; Plants - 17549; Viruses - 10; Other Eukaryotes - 704 (source: NCBI BLink).
Link: InterPro Scan - TAIR