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GT15528

CSHL Arabidopsis genetrap mutant lines

Original: GT15528

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15528

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17506270 [Map]; Strand: w
      • AT2G41930.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 3586; Region: intergenic
      • AT2G41940.1 - [+] show detail - zinc finger protein 8
        Distance: -1239; Region: intergenic
    Flanking Genome Sequence: GT15528 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATATGTA 
    TTCTCTTTTT GTTCGTCTAC ACTAAATTTT TTGATATTTT GTAAGAATAA 
    TTAAATTTTA AATCCCATTA ATTTTGATTA TATATATTCC CTGATTATGT 
    CACACAAATA ATGTATATGT TGCTAATGTC AAGCTGGAAT AAGGACTATA 
    AAACTCATTA ATCCATAAAT TAATCTGACC TTTTTCATCT CACTCGACCA 
    ANCGNACCCA CCAAGGTGCC ACCAAATCAT AACAGGTTTG CGTGTGATCG 
    TGGAGTTTAT GAATTGAAAT ACATAGAGTG TAAAATGCTT CAGATAAGCA 
    TGGATTGGCT AAACGATGAG AACATAAAAG AGGCGCGCAT GAAGATAGCA 
    ATGGACCTTT GGGAAGCTTC TCGTGATCCT ATCTTGATAC AGAGAATGAA 
    AAACTATGCT CCTCCTTTTG TTTCGTCGGA TATGATCGAA ATAGATTGAT 
    TTTTTTTTAG TTTTTGTTGT TTTCCTTGTT TCAAACTTTG TAACTCTTGA 
    TGCTTTCAAT AGACTTCTAA GTCTTTTTGG AAATCCCGAT TAAACTATTT 
    CAAGCAATTC GTCAAGAACT GTTGTTACCT TCTCAAAAGC GTTGATACC

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT15528 - 5-prime edge 
    ACTTTCTCCC TGAATTCGAT CGATATCCAA TGCCCATCTT TTTCCGTCTT 
    TCCATAAGAT GGGGATTCAC TGTTGACATA AGAGATAAGC CAACTGTCCC 
    ATTTGTAGCT CTTCTTATTT TTCAAATAGC TCCCATGCTC GTTTTTGATT 
    CGCGCGGTAA ACATGCAATT CATGAATCCA ACACGCGGTA AATTCAGTCG 
    GCGTAACGAT GTGTTCTCCA TAAACAAATA GATCATTGCA TCTATTTCCT 
    GGAAAAAAAC ACTAAAACTT ACATTAAAAT TTGATAAGTA CGTATAGAGT 
    ACTTATCAAC GAGGGCAAAA AACATTTTAA ACTTCATTGG CAAGCCAATG 
    TTTTTTGTTG TTCATAAGTC GATCAAATAA TGCGTTACTA AGATGAGATG 
    GACCATGCTT TGGAATTCCG CGGCTGCAAC GATGTTATAC GAGAAATATA 
    TAGTTAGATA ATTGACTAAT AATAGAATCA GAAAATTAAA AAAAATAACA 
    TGATAAGAAA AAGACTTACC ATAAGATGCG TACCCATTCA TCGAAAACAC 
    TCCATTTAGC TTCAGGTACG TACACCAAAA TAGCATCTGG GTCATTCTTC 
    CCCGAGTCTG GTTTGTAACG CCAGTCGAAA TCGAAAGAGT TTTTTTGTTT 
    GACTCTGTGA TTGATCAAAT CCGGGTACCT GTGTTTTTTT GAGAAAGATG 
    ACCCATTTCT TCTTGAAGAA ATTCTAGTGA ATCCAAATTA AGGTCAATGT 
    CAAGTTCACC CTGACTGGTG TAATATTCAT CAAACAAAGC ATTTATCTCC 
    TGTCAA

AT2G41930.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G42550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41940.1

Model type
Protein coding
Short Description
zinc finger protein 8
Curator Summary
Encodes a zinc finger protein containing only a single zinc finger.
Computational Description
zinc finger protein 8 (ZFP8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G58070.1); Has 1033 Blast hits to 1031 proteins in 54 species: Archae - 0; Bacteria - 9; Metazoa - 26; Fungi - 10; Plants - 958; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR