Home
Mutant Lines
GT15533

GT15533

CSHL Arabidopsis genetrap mutant lines

Original: GT15533

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15533

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 10557682 [Map]; Strand: c
- AT1G30080.1 - [+] show detail - Glycosyl hydrolase superfamily protein
  Distance: -4467; Region: intergenic
- AT1G30090.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: 1879; Region: intergenic

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACTT 
CCATTGCTTT AATTCCAGCA ATGAATCTAC AAAATGTAAA GAGTGACGAC 
CAATGTGGTC AATCCATCAT ATTCTATCTT TCCCATGTTC GAATCAAGTT 
CGCATGTTGA TAAAGATCAC AATCTACTAC ATATACTCTT TCATTCTTCA 
ATATAATATT GCTATCTAAA ACTAAAAGTT GGGAGACACC ATAGTTAAAA 
TAATAGCTTT TGTGTGCTCA AAATAAAAGA CATATTCATT TAGATGCTAT 
ACACAACCTA ATAATATACA TAATTCAAAC ACTGTTAAAA CTAAAATAGA 
TGCTAGATCG TGGTTTACAT ATGTATATTG TATTAAATAA ACTTAGTGAT 
GAAGATCACC ATTTGGGAAC ATACTTTAGT GAAAGTACAA TAGCAAAAAG 
AAGATAACAA AGATAAAGAT GGTTTTTAGA AAAATAAATT GAAATGTCTA 
AATACAATAG ACGAAAGACT AAGTTGGGGG AGAAGATGGG AGGTAGCATG 
TGCCTGTGCG TGTAGTGTTT TTCTAAAGAC AAGTTCCTTT TTCAGTTGGC 
TCTTTTAAAT CTTAGTTCCA TCTTTAAGAA CTTGGTAGAT TGAACTATTG 
AAAAATCCAA TACAAAGCCC AAGCTTCTTC TTTTCCTTGA ATTGAC

AT1G30080.1

Model type: Protein coding
Short Description: Glycosyl hydrolase superfamily protein
Computational Description: Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G18340.1); Has 2128 Blast hits to 2112 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 18; Plants - 2098; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G30090.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G24540.1); Has 6648 Blast hits to 4175 proteins in 221 species: Archae - 14; Bacteria - 391; Metazoa - 4969; Fungi - 0; Plants - 1047; Viruses - 9; Other Eukaryotes - 218 (source: NCBI BLink).
Link: InterPro Scan - TAIR