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GT15536

CSHL Arabidopsis genetrap mutant lines

Original: GT15536

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15536

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 140617 [Map]; Strand: c
      • AT1G01355.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
        Distance: 1049; Region: intergenic
      • AT1G01360.1 - [+] show detail - regulatory component of ABA receptor 1
        Distance: -1354; Region: intergenic
    Flanking Genome Sequence: GT15536 - 5-prime edge
    TACTTTCTCC CTGGGTAATT GACGATAATT ACCGTAACCT TATCTTATAA 
    TAAATTTACC CATAACAAAG CTTATCGGAT AGGATCACCT TTGGCACTAT
    CTAGGCATGC GAACTTAAAC GCAAAAGACG ACTTTGGCGT AAATTATTAA
    CTGCTTCAAG ATAAAAACAA GGAGCCTTTT TAGTGACAGC GACAATGAGC
    TAAATACGGT TAAATAATAG GAAACCAATA TACGTGTCAT ATTTTCATTG
    GGTTATTGGC TGGCATTTTC ATCTC

AT1G01355.1

Model type
Protein coding
Short Description
Putative endonuclease or glycosyl hydrolase
Computational Description
Putative endonuclease or glycosyl hydrolase; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT5G35640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01360.1

Model type
Protein coding
Short Description
regulatory component of ABA receptor 1
Curator Summary
Encodes RCAR1 (regulatory components of ABA receptor). Interacts with and regulates the type 2C protein phosphatases (PP2Cs) ABI1 and ABI2. Functions as abscisic acid sensor.
Computational Description
regulatory component of ABA receptor 1 (RCAR1); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 7 (TAIR:AT4G01026.1); Has 395 Blast hits to 395 proteins in 28 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 392; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR