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GT15547

CSHL Arabidopsis genetrap mutant lines

Original: GT15547

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15547

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14958539 [Map]; Strand: c
      • AT2G35613.1 - [+] show detail
        Distance: 0; Region: intron3 (NonCoding)
      • AT2G35615.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: -852; Region: promoter
    Flanking Genome Sequence: GT15547 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCTAAATGAG 
    AGGTTGAGAT TTGACTTATT TGCTTTATAC AGCCTGCACA GTGTGGAAGA 
    CCCCTCTAAA GACTGAACTG GGGACAGCAA CAATGGGAAT CTGACCATCC 
    TCATGACAGT ACCTGGAAAG AGTCTCAGAA GCTTCAAGTT CAGTACGCAG 
    CTTGACCAGT CTTTCAGTCA TATAGCCATA GGGGTTGAAC TAGTGTCCAT 
    CTTCCCATTG TGATTAACGT TCTGATTTAG CATGCACCTT CGAATTAAGT 
    GAATCTATTA CCATGTGACC AAGCCATTGC ATTACTAATA TAAGCATATC 
    ACATTTCCCT TTTCTCCGTG CCAACTGAAT TTGAATTATT TTCCCTCAAC 
    TTAATCACAT GTTTTCCTCA CGGCCAAAAG TACTCTCAGT GTTACATGAT 
    TACCACAACA AATGATTTAA ACTTTGAACT TTTGAAGTTA TCGAGCAACA 
    TGGCAAATCC TGGTCCTATA TGACATAACA TGAGTTCCTC TGCCTATTGT 
    AAAATTAGGA AACACAAAAC CAAAATGATT ATATCTGGTA TTATAGTGTG 
    GTGTATAACA TATACTCACA CAAGATATGC TCTTAAGATG ATAAATGTCT 
    AATCTTCCAA GTCCCAATTT TGAAAACGTT GATATTAATT TCCCCTCAAC 
    CCCACTAGCC TCAAATTAAA TTAGCAGCCT TAGTGTGAAA TTAAAAGATA 
    GCTAATGAAT TGCATTTCAG ACTTTCACCT CCCCACTCAC GTAGCTATAA 
    CTCCTTACCG TTTCAAATCT CTTCACTTCC CAATTTTGTT

AT2G35613.1

Model type
Pseudogene
Curator Summary
unknown pseudogene
Link
InterPro Scan - TAIR

AT2G35615.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G31450.1); Has 2848 Blast hits to 2831 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 342; Fungi - 487; Plants - 1854; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink).
Link
InterPro Scan - TAIR