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GT15579

CSHL Arabidopsis genetrap mutant lines

Original: GT15579

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15579

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21188339 [Map]; Strand: c
      • AT3G57250.1 - [+] show detail - Emsy N Terminus (ENT) domain-containing protein
        Distance: 1088; Region: intergenic
      • AT3G57260.1 - [+] show detail - beta-1,3-glucanase 2
        Distance: 178; Region: intergenic
    Flanking Genome Sequence: GT15579 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTCGTTA TCAGTTCGCG 
    TACGACAGTG GTAAAACATG CACTTTAATC AATCGTTCTC TCCTTGAATG
    TAAAATGAAT GTTGATAGTA ACAAAAAAAG AGGTGAGAAG AAGTTCGCCA
    AGATGACTCA TCGGATCATG CATACTCAAA AACATTTTGC TAACAAGAAT
    TCCACAAAAT TTTGGGTCTC ACATTCCCTA AGCAAGCTTG TTTTATTATT
    GGGCCTATAG GCCCATGCTG ATTTTTTTCC TTATTTATGC TTGCAGCTCA
    TTTATAACCT TAAAAATAAC AACATACTAC GCGCTGAAAG CGCATTAATT
    ATTCCTTATT ACTACAACAA GTTCCCAATT TTTAAATACG CTTACATAAA
    AAGCCCACAA GTCTCTAAGG ATTAGTTGAA ATTAACTTC
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21188253 [Map]; Strand: c
      • AT3G57250.1 - [+] show detail - Emsy N Terminus (ENT) domain-containing protein
        Distance: 1002; Region: intergenic
      • AT3G57260.1 - [+] show detail - beta-1,3-glucanase 2
        Distance: 264; Region: intergenic
    Flanking Genome Sequence: GT15579 - 5-prime edge
    ACGACCGTGC TTTTTGTCTT ATAACTATTT TGTTGTGTTT ACAATTTTAT 
    TCTGGATTCT AGTTTATTCT AATTTTGAGA AAGTGGGGAA CGTTGTAAAC
    AGCGAGAAGT AAAGACAGAG AAATAGTCAA CTAGTATAAC ACTATACCCA
    AAAAAAAAGG AATGTATAAA TGGTATATTT TCTTATATAA CAAAATAAAA
    GTTTTTTTTG ACAAGGGGCG GGTTATTTCT CTATAAAAAA AGACGTGTTA
    AATTATCTTC TACGCACATT TAATAATTTT TGACTTGAAA AAAATGTGTA
    AAAGTTTTCA ACATTTAAAT GGCTTTTCCC GAATTAAGAA AAAAACAAAA
    TCGGTTTGAA AATTAGGAAA ACAAACTGTT AAAGAAAAGG GGGATCAAAA
    ATTCAAAAGC TACTATATAT CCTTCTGGAA CGAATTTCAT ATAGCAAAGG
    AGGGAAGCTT AGAGGAAATC CCAAATTCTT CTCTATAAAT TATGGCCAAA
    GGTTGTTGTT TTGTATGAAT TACATATGTA GATCCAACTT GGGATATTAT
    AGTTTAGACA AAGGTTGGCT TCTTCCTCAA ACT

AT3G57250.1

Model type
Protein coding
Short Description
Emsy N Terminus (ENT) domain-containing protein
Computational Description
Emsy N Terminus (ENT) domain-containing protein; CONTAINS InterPro DOMAIN/s: ENT (InterPro:IPR005491); Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57260.1

Model type
Protein coding
Short Description
beta-1,3-glucanase 2
Curator Summary
beta 1,3-glucanase
Computational Description
"beta-1,3-glucanase 2" (BGL2); FUNCTIONS IN: glucan 1,3-beta-glucosidase activity, protein binding, cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: systemic acquired resistance, response to cold; LOCATED IN: apoplast, cell wall, vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 3 (TAIR:AT3G57240.1); Has 2232 Blast hits to 2218 proteins in 176 species: Archae - 0; Bacteria - 18; Metazoa - 3; Fungi - 79; Plants - 2105; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Link
InterPro Scan - TAIR