Home
Mutant Lines
GT15607

GT15607

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT15607

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 27112426 [Map]; Strand: c
- AT1G72040.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 0; Region: intron4 (CDS)

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAATGGTGA 
CATTACGGTA GTGTGAGAAT GAGAGCTTAC TGCGTTTTTG CTTCAATATC 
CCGGCTGAAG TCGATATTGG GTTCACAGTC CAAAACCAGA GCAGGGACCT 
GTTGAAACAA ATGAAACAGT CTAAGCAAAA TCTATCTTAA GACTTTTAGT 
ACAAAGAAAG GAAAAAAGGA GATAAGCTTA CCTTCTGGAT ACTAGAATGC 
ATATGATTTC CTTCCAAGTA AAAGACACGG TCTTTTATAT CAGGATGCAG 
AGAGTTGTCC ATGTGTAAAG ATGGCCTACT AACAGACAAT ACACCATGGT 
TTCCGCTCTC AAACGGAAGC AGCCAGCTCT CGTGCTTCTC GTGCAAATCT 
TGGAGGTATT TCAGAGAGAC TCCACCTTCT CTNGCCTCGT ATCATGAGCA 
TCATCCGCTT GTGGCAAGTG TCTGGACTCG CCCTTAAGTA TATAAACCCA 
TCAGGAACAA GTCCAGGTAA AGAAGAGACA ACCGGATCAA ACCAAGAGTC 
GTAGATGCTG ATCTCCATCT CATTCATCCA TTTTGCTTCA TGAACCGCAC 
GCACAAACAC CTAAACACCA AGTTCCACAA CATATTAGGT TTGCAATCAC 
ACATTTCAAA CTATCAATTT AAATAACATT TGCTTTAAAT TTACCATTCT

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 167425 [Map]; Strand: c
  - AT2G01350.1 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -166; Region: promoter
  - AT2G01350.2 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -178; Region: promoter
  - AT2G01350.3 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -172; Region: promoter
  - AT2G01350.4 - [+] show detail - quinolinate phoshoribosyltransferase
    Distance: -178; Region: promoter
  - AT2G01360.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
    Distance: -572; Region: promoter
Flanking Genome Sequence: GT15607 - 5-prime edge
```
GAAATATATT ACACACCACA AAACACACAC TAGACACAAG AGTATATGTT 
TTGAGATAGA ACTCCGTACT TGTTACATGT TTGAGTGTTA TGTTTTATGT 
TGAATTTAAC TAAAATGCAG ACGTTAGTAT GGAATGGGCT TCACAAATAA 
AAGCCCAATA GTATGTTTTT TTGGTAGGGA GCCCAATAGT ATGTTGGTTC 
ACCCAAATAT CATTTCTTTC TCTGAGAGCT GTTTATTATA TTCACACAAA 
GAAGACCAAC AAGAAACAGA GTTGAATCAG TTCTACAATG ATCTCTGTCT 
CTCGATTCTT GTCGCCTCAA TTCTACGCAA TTCCAAGGTT TTATCCGACA 
AAACCCAATC TTTTAA
```

AT1G72040.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.1

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5853 Blast hits to 5853 proteins in 1914 species: Archae - 184; Bacteria - 3582; Metazoa - 59; Fungi - 129; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.2

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.3

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5825 Blast hits to 5825 proteins in 1916 species: Archae - 184; Bacteria - 3588; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01350.4

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01360.1

Model type: Protein coding
Short Description: pentatricopeptide (PPR) repeat-containing protein
Computational Description: pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G01390.1); Has 425 Blast hits to 414 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR