Home
Mutant Lines
GT15610

GT15610

CSHL Arabidopsis genetrap mutant lines

Original: GT15610

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15610

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 30354505 [Map]; Strand: c
  - AT1G80770.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: -610; Region: promoter
  - AT1G80770.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: -610; Region: promoter
Flanking Genome Sequence: GT15610 - 3-prime edge
```
GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAATCCGAT 
AATCTTTTGA ATCCCTGAGC AGATCATAAC AAAAACAGAG CCGTGCGTGA 
ACACAAGCAA ACCATACCAA CAGTCGAGAA CATGAAATAT TTATACCGCG 
ATTAATTCTT CACGTGCT
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 11095357 [Map]; Strand: c
- AT2G26040.1 - [+] show detail - PYR1-like 2
  Distance: 0; Region: exon1 (CDS)

CTTCTCCTGC GACCGATTCT GCCCATGAGC TCATCCCCGG TCGTGAAAGG 
CCTAACCAAT GAAGAGCAGA AAACCCTCGA ACCGGTTATC AAAACGTACC 
ACCAGTTCGA ACCAGACCCA ACCACGTGCA CTTCTCTCAT AACCCAACGC 
ATCCACGCTC CGGCCTCCGT GGTTTGGCCT CTTATCCGCC GCTTCGACAA 
CCCCGAACGC TACAAACACT TTGTAAAAAG CTGCCGTCTC ATCTCCGGTG 
ATGGTGACGT CGGAAGCGTC AGAGAAGTGA CCGTAATCTC CGGCCTCCCA 
GCCTCAACCA GTACCGAGCG GCTTGGGTTC GTCGATGACG ACCACCGTGT 
TCTAAGCTT

AT1G80770.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: pigment defective 318 (PDE318); FUNCTIONS IN: ferrous iron transmembrane transporter activity, GTP binding; INVOLVED IN: ferrous iron transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674), Ferrous iron transport protein B, N-terminal (InterPro:IPR011619); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1); Has 11067 Blast hits to 11052 proteins in 2859 species: Archae - 320; Bacteria - 7505; Metazoa - 379; Fungi - 348; Plants - 242; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G80770.2

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: pigment defective 318 (PDE318); FUNCTIONS IN: GTP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1).
Link: InterPro Scan - TAIR

AT2G26040.1

Model type: Protein coding
Short Description: PYR1-like 2
Curator Summary: Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.
Computational Description: PYR1-like 2 (PYL2); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 3 (TAIR:AT1G73000.1); Has 445 Blast hits to 441 proteins in 38 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 439; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR