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GT15613

CSHL Arabidopsis genetrap mutant lines

Original: GT15613

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15613

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21184 [Map]; Strand: w
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: -253; Region: promoter
    Flanking Genome Sequence: GT15613 - 3-prime edge 
    AACGGGTAGA GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATC 
    CGATAATCTT TTGAATCCCT GAGCAGATCA TAACAAAAAC AGAGCCGTGC 
    GTGAACACAA GCAAACCATA CCAACAGTCG AGAACATGAA ATATTTATAC 
    CGCGATTAAT TCTTCACGTG CTTCTACTCA CTCGACCAAN CNCAAATTTC 
    AACTTTTTCT TTTTCAGTTT TGACGAAAAA CAAATCAATA TTACACATTA 
    TGCATCTGCA AATTTTAGCT TTAGACTTTT TGCATTTTAC ACTACAAATT 
    TCAATATATC TGCTCAACAC ACTATGTATT TTGAAATTTA AATAGTTTAC 
    ATTTGGTGTT AAAAAAATAC ATTTATGTGT GAATAATAGA TTAAAAAAAT 
    AGCATATATA TTATTCTTAA CTTTTGTACG AACATGGCAA CCACCGTTTT 
    CATATTTTTG GGAGTGTATA TATCATACTT AACTGTCAAA CCAACTGGGG 
    TCGACCTTTG GAGTTATATG ATTTGATTTC T

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21241 [Map]; Strand: w
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: -196; Region: promoter
    Flanking Genome Sequence: GT15613 - 5-prime edge 
    ACTTTCTCCC TGGCTAAGAG AATAGAAAAA GAGTATCGCC GACGCAAAAA 
    AGGCTTGGCC GAGACAAAAA GGCCCAATTT TACTACTGTC TAAGAAGAAG 
    AGCATCGAGA ATTTACAATG GGCTCAAGCC CAGGCCCGTT TTAAATAGAC 
    TCCTATTGAT TGGTTAGCAA GTAAGACCGG TTCCAATTTC CGGTTGGGTA 
    TTGAGTTGGT TTAAGTTATT AGCCGTTCGT CGTCTTCCTC TGGAGAAAGA 
    AAAAAAGAGA GGAAACAATG GAAAATCGCC ATCTCCCTTC CAAATTCATC 
    TCACTCGAC

AT4G00060.1

Model type
Protein coding
Short Description
Nucleotidyltransferase family protein
Computational Description
maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR