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GT15614

CSHL Arabidopsis genetrap mutant lines

Original: GT15614

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15614

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17466707 [Map]; Strand: c
      • AT4G37070.2 - [+] show detail - Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT4G37070.1 - [+] show detail - Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT4G37070.3 - [+] show detail - Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT4G37070.4 - [+] show detail - Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15614 - 3-prime edge 
    TCAGCTATCT CGTCGAAGTA ATCCGCAAGC CTCGCCTCTT CTCCATCGAG 
    TTCCTATGTA TACCGAGAAA GTTTAATTTT TCAAGAAAAT AACTACAAGA 
    AGAAAGATGT TGTTTAATTA CTCTATAGTA AAGATCAAAT ATGAATTCGT 
    GATCATAAAT CGATGCAGGG ACTTAATAAC TACTAAGTAT AAAATTCGCA 
    TGGCGAGTTA TATATGATAT ATCCCTTCAT CTCACTCGAC CAGAAATTTG 
    NATTCTACTA TTAAACCTGA AGTTGTTTTT CGAGAAAGGC AAGGATTACT 
    CCGGCGATGA TTCCTCTGAC TCCACCACCA TCAA

AT4G37070.1

Model type
Protein coding
Short Description
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
Curator Summary
Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity.
Computational Description
PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37070.2

Model type
Protein coding
Short Description
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
Curator Summary
Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity.
Computational Description
PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 2116 Blast hits to 2106 proteins in 385 species: Archae - 0; Bacteria - 498; Metazoa - 234; Fungi - 173; Plants - 892; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37070.3

Model type
Protein coding
Short Description
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
Curator Summary
Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity.
Computational Description
PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 2103 Blast hits to 2094 proteins in 385 species: Archae - 0; Bacteria - 498; Metazoa - 223; Fungi - 173; Plants - 890; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37070.4

Model type
Protein coding
Short Description
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
Curator Summary
Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity.
Computational Description
PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 1996 Blast hits to 1989 proteins in 369 species: Archae - 0; Bacteria - 491; Metazoa - 206; Fungi - 135; Plants - 869; Viruses - 0; Other Eukaryotes - 295 (source: NCBI BLink).
Link
InterPro Scan - TAIR