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Mutant Lines
GT15626

GT15626

CSHL Arabidopsis genetrap mutant lines

Original: GT15626

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15626

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 7476746 [Map]; Strand: c
- AT2G17170.1 - [+] show detail - Protein kinase superfamily protein
  Distance: 308; Region: intergenic
- AT2G17180.1 - [+] show detail - C2H2-like zinc finger protein
  Distance: 89; Region: intergenic

CGGTAGAGGT ATTTTAGCCG ACCGTTACCG ACCGTTTTCA TCCCTAAGAT 
TATTCACACA TATATACAGA GAGAGTATTG TTGTTAATTA AGAGAAAGAA 
CCAAATACCC AATAAATATA TAAAACCTTA AGTTATCATA TATCAAAGTC 
CTAACCTAAG ATCCAAGGAA CAACCTAACG TTGTGTCTGA AGATGTCGCC 
GCAGGAACAT TAAGATCAAT GCCCCTGACT TGGTTCTCTT CCTGATCTTT 
CTCCCAATGA CATCTCATGT GACCTCCTAA CGCTTGACCA CTGGAGAACA 
CTCTAGAACA GATGTTACAT CAATGATT

3 prime edge [+] show sequence

Not mapped

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCGTGA CCCGGCCGCG 
CGGGGGATCC ACAGGACGGG TGTGGTCGCC ATGATCGCGT AGTCGATAGT 
GGCTCCAAGT AGCGAAGCGA GCAGGACTGG GCGGCGGCCA AAGCGGTCGG 
ACAGTGCTCC GAGAACGGGT GCGCATAGAA ATTGCATCAA CGCATATAGC 
GCTAGCAGCA CGCCATAGTG ACTGGCGATG CTGTCGGAAT GGACGATATC 
CCGCAAGAGG CCCGGCAGTA CCGGCATAAC CAAGCCTATG CCTACAGCAT 
CCAGGGTGAC GGTGCCGAGG ATGACGATGA GCGCATTGTT AGATTTCATA 
CACGGTGCCT GACTGCGTTA GCAATTTAAC TGTGATAAAC TACCGCATTA 
AAGCTTTTGC CATTCTCACC GGATTCAGTC GTCACTCATG GTGATTTCTC 
ACTTGATAAC CTTATTTTTG ACGAGGGGAA ATTAATAGGT TGTATTGATG 
TTGGACGAGT CGGAATCGCA GACCGATACC AGGATCTTGC CATCCTATGG 
AACTGCCTCG GTGAGTTTTC TCCTTCATTA CAGAAACGGC TTTTTCAAAA 
ATATGGTATT GATAATCCTG ATATGAATAA ATTGCAGTTT CATTTGATGC 
TCGATGAGTT TTTCTAATCA GAATTGGTTA ATTGGTTGTA ACACTGGCAG 
AGCATTACGC TGACTTGACG GGACGGGCGG CTTTGTTGAA TAAATCGAAA 
CTTTTGCTGA GTTGAAGGAT CAGATCACGC ATCTTTC

5 prime edge [+] show sequence

Chromosome: 4; Position: 12505446 [Map]; Strand: w
- AT4G24060.1 - [+] show detail - Dof-type zinc finger DNA-binding family protein
  Distance: 0; Region: exon2 (3UTR)

CCTACTATGG ACTGGGATGT TGAGTGGAGG ATCATGGTGC TAATTAATTT 
CTCGGTTTGG TTGATGAAGA TAGTACTATT AGTGGTTAAT TATTGCTATT 
TATTTAATTA ATCAATATGT TCTTAATTTC ACTTTGAATT TTCTTATTGG 
TGGGTTTTTC CTTTTTTTTG TTAACTTGGA TTTTTAAGGA TACTATTGGG 
GGTGCATGCA TATTGAATGA CTTTAATTTG TTATCCCTAA CACAGATTAT 
AAATGATACA TTGGTTGGTC TTTTGTTGTT CCTTCTCTTG TTCA

5 prime edge [+] show sequence

Chromosome: 2; Position: 7476690 [Map]; Strand: c
- AT2G17170.1 - [+] show detail - Protein kinase superfamily protein
  Distance: 252; Region: intergenic
- AT2G17180.1 - [+] show detail - C2H2-like zinc finger protein
  Distance: 145; Region: intergenic

ACTTTCTCTG TGTGATACTT TGTATGATGA ACGTATAGGA TTGTGGTATT 
GTATTCTATA TATAAGTTAA TTAGTTTATG AAATGCAAAT AGAGTTATTT 
ACTAAATGTC CAATATTCAA GAAATTAGCT TTATGAAGTT TAAAACGTTG 
AATCTTTTTC CCTATGTAAA AAGTTTATAT TGTTTGATCA TACATGTATA 
TGTATCATGC ATGGATTATG GTGTTTCTTC ACAGTGTCAG TACACTAAGT 
TAGAAAATCA AGATTCTTCT TCCCTAAAAA TGTTGGCTTC GAGAAGAGTT 
ACTTTGTTGA AGCTATTAGC AGATTCAGGG TGGAAGTTGT TGTTGACTCG 
AAGATGATGC CACATCGTGC TGCTTTGTTA CTTCATGCAT TTCAGAAGAT 
GAAATCTACA AGCAAAAAGA TTTGGTTTTA TAACATGAAT GCGAAAAATC 
TTCAGGGATG AAATTATTGT AACAGTAACC CTCCTTACTT CTTTTTTAGC 
CTGCAAGGCT TTAAGTGTTG CAACAAGCTT TTTAGTGATG CCATTCTCTA 
TATAACCCTT CCACTGCAAA CATTCAGAGG CGAGTTTTAA AACTATAGTA 
GCTTCTTCTG TAGAGAACTT TCCCTTCAGA TTTGGATCCA TGAGCTCAGT 
GACATCCTTT CCATTGATCA TCTCAGGAGC CTAGAAACAG AGGATAAATA 
ACCACTCAGT AAAATGTAAC TTGTGTTGCA AGAAACAAGG ATTCCACAAA 
GTCAAGCTTG AACAGAATTA CTTACATGGC TC

AT2G17170.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT2G17090.1); Has 20684 Blast hits to 20439 proteins in 426 species: Archae - 2; Bacteria - 159; Metazoa - 1288; Fungi - 17; Plants - 18886; Viruses - 23; Other Eukaryotes - 309 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G17180.1

Model type: Protein coding
Short Description: C2H2-like zinc finger protein
Computational Description: C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT4G35280.1); Has 4297 Blast hits to 3474 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 3181; Fungi - 0; Plants - 1043; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G24060.1

Model type: Protein coding
Short Description: Dof-type zinc finger DNA-binding family protein
Computational Description: Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G64620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR