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GT15649

CSHL Arabidopsis genetrap mutant lines

Original: GT15649

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15649

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 528020 [Map]; Strand: w
      • AT4G01245.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15649 - 5-prime edge
    CTTTCTCCCT GGGCTCTTAT TATGTTTATT CTATGACCAG AAACGAATGA 
    GGGAACTTGA GTTGATAACT GAAGAGAACA GAGCTATACG GGACATAAAC
    GTTTCAAAGA AATGCAGTTA CACAGAAGTT TCCCTTAAAA GACCCGACAT
    CGTCAATGTC ACCTTACAGC AATGGTACTT TTGTTGTACA TCATGAATTC
    AAGTTCTCTA TAAAAACATT TGGTTAGGTG TGTGTGTGTG TAGGAGTCAT
    CTCAAATTAT TTTTGAAAGG TTATCGTCTC TAATTATAAG TAAACTTCAA
    AACTAAGTGA TGAGTTTTTG CCTCTTTCCA AAGTTATTTC CCAATGTATT
    GGTTGAATAG AACAGAAAGT ATTCTACTGA AACATGTTTT GAAACGCCAT
    TCCAAGACAT CAATAACATA AATTACCACT TAACATAAAC GAAGGGGTCT
    TATACCCAAT CAAAGCATCC AACAATAGAA GCAAACAGAA TAATTATCTG
    ATAGAACAAA AGTCTTAAGA AGCCAAACCA CCGATAAGAA ACTAAAGCCG
    CAAAATGCAA AAAGCAAACT AAAAAAGGAT AAGAAAAACA AGCCAACAAC
    AAAC

AT4G01245.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G01270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR