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GT15655

CSHL Arabidopsis genetrap mutant lines

Original: GT15655

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15655

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 426178 [Map]; Strand: w
      • AT2G01918.1 - [+] show detail - PsbQ-like 3
        Distance: -465; Region: promoter
      • AT2G01920.1 - [+] show detail - ENTH/VHS/GAT family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15655 - 3-prime edge 
    GGGTTGCTCT GTATGTATCT ATAGATGAAT TGAACGTTTT CGATGTCCAT 
    TGAGACATCG TTATGACTCG ACGCTTAGAT AACCGCCGCC GTGAATTTTT 
    CATCCGTCGC GGAGATGAGA CAGAGTTTGT CCTTTATAGC TCCGGAGACG 
    CGTCTCCACA ACTTCATTT

AT2G01918.1

Model type
Protein coding
Short Description
PsbQ-like 3
Curator Summary
Encode a protein homologous to each PQL protein. Mutational analysis indicates that PQL3 is also required for NDH activity.
Computational Description
PsbQ-like 3 (PQL3); CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01920.1

Model type
Protein coding
Short Description
ENTH/VHS/GAT family protein
Computational Description
ENTH/VHS/GAT family protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G14686.1); Has 316 Blast hits to 316 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR