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GT15657

CSHL Arabidopsis genetrap mutant lines

Original: GT15657

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15657

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 187538 [Map]; Strand: c
      • AT4G00430.1 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: exon1 (5UTR)
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15657 - 5-prime edge 
    AGCTACACAC GAGAAAGAAA AAGCTCACAA CTTTAACCTT TCTGGAGAGA 
    GAAGAACAAA AGAGGGAGAG GGAGAGAAAT GGAAGGCAAA GAAGAAGATG 
    TACGAGTGGG AGCTAACAAG TTCCCGGAGA GGCAACCCAT CGGTACATCG 
    GCTCAGTCCA CCGACAAGGA CTACAAAGAG CCACCTCCTG CGCCACTGTT 
    CGAGCCCGGC GAGCTCAGCT CATGGTCTTT CTACAGAGCC GGAATAGCTG 
    AGTTTATCGC TACTTTCTTG TTTCTCTACA TCACTGTTTT GACTGTAATG 
    GGAGTTAAGA GAGCACCAAA CATGTGTGCT TCTGTTGGAA TCCAAGGTAT 
    CGCTTGGGCT TTTGGTGGCA TGATCTTTGC TCTTGTCTAC TGTACTGCTG 
    GAATTTCAGG TAACCTTCTC TCGATTTTCC CATTTTTCTG TAATCTCTGT 
    TTTGGTGGGT TCTCTGTTTT GGTTCTGCTT TATTTGCTCT GTTTTGTTTC 
    TGAAAACCAT TATGTGAGTC CTCTGTTTT

AT4G00430.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
plasma membrane intrinsic protein 1;4 (PIP1;4); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1); Has 10702 Blast hits to 10683 proteins in 2216 species: Archae - 88; Bacteria - 5147; Metazoa - 1472; Fungi - 442; Plants - 2512; Viruses - 2; Other Eukaryotes - 1039 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00430.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR