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GT15668

CSHL Arabidopsis genetrap mutant lines

Original: GT15668

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15668

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16819342 [Map]; Strand: w
      • AT5G42060.1 - [+] show detail - DEK, chromatin associated protein
        Distance: -387; Region: promoter
      • AT5G42070.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15668 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAC 
    ACCAGTGATT CACTACTACG GTATGTTAAT GCCTAGTATT ATTTATATAC 
    ACTTACAATC AACAATGAAA CAAATTGGAC CGCAACAAAA ACCGTCTTTG 
    GCATGTACAA GAATGTCAAA ATGGGTTTGA GAACCTTGCA GAGTAATGAT 
    GATCATGT

AT5G42060.1

Model type
Protein coding
Short Description
DEK, chromatin associated protein
Computational Description
DEK, chromatin associated protein; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK, chromatin associated protein (TAIR:AT1G64490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G42070.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR