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GT15681

CSHL Arabidopsis genetrap mutant lines

Original: GT15681

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15681

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18525444 [Map]; Strand: w
      • AT4G39950.1 - [+] show detail - cytochrome P450, family 79, subfamily B, polypeptide 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15681 - 5-prime edge
    CCCTGCCTTG TATCTCCTCT CAAACTTCCA GCTTTTGTGG CTATAACCTT 
    AGTGATGCTA CTCAAGAAAC TGATGACGGA TCCCAACAAA AAGAAACCGT
    CTCTCCCACC GGGTCCCACA GGATGGCCGA TCATTGGAAT GATTCCGACG
    ATGCTAAAGA GCCGGCCCGT TTTCCGGTGG CTCCACAGCA TCATGAAGCA
    GCTCAATACT GAGATAGCGT GCGTGAAGTT AGGAAACACT CATGTGATCA
    CCGTCACGTG TCCTAAGATA GCACGTGAGA TACTCAAGCA ACAAGACGCT
    CTCTTCGCCT CGAGGCCTTT AACTTACGCT CAGAAGATCC TCTCTAACGG
    CTACAAAACC TGCGTGATCA CTCCCTTTGG TGACCAATTC AAGAAAATGA
    GGAAAGTTGT GATGACGGAA CTCGTATGTC CAGCGAGACA CAGGTGGCTC
    CACCCGAAGA GATCAGAAGA AAACGATCAT TTAACCGCTT GGGT

AT4G39950.1

Model type
Protein coding
Short Description
cytochrome P450, family 79, subfamily B, polypeptide 2
Curator Summary
Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.
Computational Description
"cytochrome P450, family 79, subfamily B, polypeptide 2" (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink).
Link
InterPro Scan - TAIR