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GT15689

CSHL Arabidopsis genetrap mutant lines

Original: GT15689

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15689

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19350846 [Map]; Strand: w
      • AT2G47130.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -307; Region: promoter
      • AT2G47140.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: GT15689 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTATCTC TGAGGTTGCA 
    AATTTCCTTG AAATGTGGAT GTTGTATTTT TATATGGTAA CATTCATTAT 
    CCAACATATT GCACATCTCG AGGATAATTT ATTTAAACAA ATACTACAAG 
    CTTATTTGAT AAATCGTCTT TCTAGTCTCT CTATTTTGAC TATGGGTTTT 
    GAATTTTGAT ATTTCAGTGA AGAATCCTAA CCATTTAGTA CTAATTTACA 
    CGTTATAGTT TCAAAATAAT TGATTAAAAA ACAAAATAGG AAAAAAAAAA 
    TTGATTAATA TAAA

AT2G47130.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G29260.1); Has 122340 Blast hits to 122121 proteins in 3572 species: Archae - 980; Bacteria - 79164; Metazoa - 5393; Fungi - 6725; Plants - 2704; Viruses - 5; Other Eukaryotes - 27369 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47140.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink).
Link
InterPro Scan - TAIR