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GT15710

CSHL Arabidopsis genetrap mutant lines

Original: GT15710

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15710

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 745815 [Map]; Strand: w
      • AT4G01720.1 - [+] show detail - WRKY family transcription factor
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15710 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATTGCTA ACAAAACTCT 
    TCTTTGGAGG TCGTTGTAAC TCTCACTGAC CTCATCTAAT AAATGCTTCA 
    GTTTGTGATT CTCCTCGTGA AGCCTCTCTA GCTCCAACTT CAGTCTACTA 
    ATCTGCAAAT TGTTTAATAA TCATAACCGT AACTATAAAA GTATAAATCA 
    AACAATTTTT TTTTTCATTA AAAACAACCT ACAGTTTTAT ATACGGAACT 
    AAATTAAAGA TTACAAAAAA GAAAAGAATT AAATATGTGT ATATACATAA 
    ATGAATATGC GCATTTAGAT AAACTCACAT GATCGGGTAA TCAAGTGTGT 
    GTGTGTGTCC CCACAACAAA AATTACCATC CGATTATTTT GTTGACAAAT 
    ACAAATAGTT TTTTTTTTTA AGAAACAAAA ACAAAAAGTT GGTATAAAAG 
    GGAATTTTTC TTAAAACAAA CCCTGAAATT TTGTTCCCCC GGGATCCTCT 
    AAAATTCTTT CAAAAAAAAA AAAAAACATT TTAAAAACCC TTCCTGGAGT 
    TTGGGTTTTG CCACCCCCAC CATGGCTGGA GGTCCCAGGA CAGGAATTTC 
    CCAACCCTAA CCCCCCCTAT TAGGCCAGGA ATTTTTTGAA ATTAAGTTAA 
    ACCGCCCAAA CATATATTGG TATCCAACCC CTAAAATTAA AAAACTTCCT 
    TTAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 745886 [Map]; Strand: w
      • AT4G01720.1 - [+] show detail - WRKY family transcription factor
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT15710 - 5-prime edge 
    CTTTCTCCCT GGTTAGCAAG ACAAACACAA GTGGAAGGTC TTCATCATAA 
    ACAACATGAG GTACTTGATA AAATCATAAA AATGATAATA AAATATATAT 
    CAACATTTCG GTTTATTAAA AAATAAATTG TATATTTGTC TTTTTTATGT 
    GGCACCGAGA TTAGCTTAGG TTTTAGTGTT TGATTTATCT GGTTTTGAAA 
    ATTTAAAGTG ATCTATTAGT TTTGTTTTTC TCGAAAGCAA TTAAAATTTT 
    AAAACTATGT GTAATATGCG TAAATAATGG ATGTAGTTTA GTTATGTAAT 
    GAATTCATAA TTTTCATCTT AAATGCCCAG ATTGAAAGTC ATAAGACGAA 
    TAAATACGTG CAGCTTTTAT TTGATAAAAT ATGAAGAAGA TGAAATAAAT 
    AGCTAGCCAA TGACTTGGTC AAGAAAAAAA TGTTTCATAA CTTAATATTA 
    AATGGAAAAT CAAATTTCGG ACTAAGATAT TTCAAACTAG AAAAAACCTT 
    TTGTTTTCAG AAGCTACAAA CGATAAGTTA TTTGTTTATA GTTAGGTATG 
    TTCCTGTATA TGCATCATAT TTTGTTTGTC CACAATCTGT AGATGCATCA 
    TATATG

AT4G01720.1

Model type
Protein coding
Short Description
WRKY family transcription factor
Curator Summary
member of WRKY Transcription Factor; Group II-b
Computational Description
WRKY47; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3605 Blast hits to 3148 proteins in 215 species: Archae - 2; Bacteria - 4; Metazoa - 47; Fungi - 10; Plants - 3482; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
Link
InterPro Scan - TAIR