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GT15730

CSHL Arabidopsis genetrap mutant lines

Original: GT15730

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15730

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 150246 [Map]; Strand: w
      • AT2G01290.1 - [+] show detail - ribose-5-phosphate isomerase 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15730 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACATTC 
    GACCTCCTCT CTTCATTCTT AATTTCTCAA AAATCTTATC TTTCTCCCTC 
    ATTTTTCCCG TCGAGGGTTC CTTAATCTCC TTCCTAGGAA CGTTTCATCG 
    ATTTCATATT TGCTTTCCTT AATCCACAAC GTTTCTTCCT TCGTTTTTTT 
    CTGCAATTTT GTTTTCCTTT ACACCAAATT CATCCTTCAC TCGAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 150315 [Map]; Strand: w
      • AT2G01290.1 - [+] show detail - ribose-5-phosphate isomerase 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15730 - 5-prime edge 
    CTTTCTCCCG AATATATTGA GGAAGAATAG CGTGAAAGTT ACAAAGAATG 
    AAGAATGTAT TTGTGTGGTG GCGGAGAAAA GAAAAGAAAG TGAAGACTGA 
    ACGAAGAAGA AGAAGAAGAA AAGATAGGGT TTGTGTTTTG TGGGCGACAA 
    CGGTCTCACT TTCGAGGTTA CACAGACCTG AATTCGTTTT TTGTTTCGGT 
    CCCATATTTT GTCTTTATTT ACATAAACTA ACCCAACATT TATTTACATT 
    TACCAAATCG GTGCTTCACT TTCCCCATGA TTCCCAAAAT ATTCTGTCTT 
    TTCTTTTCTT TTTACTGACG CACCCTTAAT TTTTGTTTGT ACGTAATTAA 
    TTATAGAGTA ACGTTTAAAA ATATGAATGG GAGCCAGAAA AACTATAGAC 
    ACCGTTCACA AAATGAAATT ATCAACCACA ACATGATGAT CCTATTAAAA 
    ACAAAAACAC AACATGATGA TTACGTAGTA TATTTGACCA AACATATCCG 
    AATGTATAAT TATAAACCTC ATTTAAGTTA TCAAGAAACA CTTTTATAAT 
    TAGATGTGTT TTATTAGTAT TGTT

AT2G01290.1

Model type
Protein coding
Short Description
ribose-5-phosphate isomerase 2
Curator Summary
Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death.
Computational Description
ribose-5-phosphate isomerase 2 (RPI2); CONTAINS InterPro DOMAIN/s: Ribose-5-phosphate isomerase, type A, subgroup (InterPro:IPR020672), Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT1G71100.1); Has 5035 Blast hits to 5035 proteins in 1937 species: Archae - 235; Bacteria - 3542; Metazoa - 112; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).
Link
InterPro Scan - TAIR