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GT15738

CSHL Arabidopsis genetrap mutant lines

Original: GT15738

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15738

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 122951 [Map]; Strand: w
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -325; Region: promoter
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -325; Region: promoter
    Flanking Genome Sequence: GT15738 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGACAA 
    TTTTATCGTA TCACCATAAC GACAATAAGG GCCGGACTAA TGGTTGTACA
    CATGTCCTCT CCTTTTACCC TTTTAAGGCT TTAGCTAAAT CTAAACCACA
    TTTATAATCG GTTATTATAT GAATCTTCTT CTTGCTCGAA AACATGACGA
    GCTACTATTC TAAGTAAAAT AACAAAGATG AGCTGTGATT TATATGGTAA
    AGTAAGATAT AAAAGAGGTA GTACTAGTAC TGTAAAAGCA GACTCGAGGA
    ATAAAGAAAG CAGGAAGAGC GTGGTGGTAT CTTGTGGCAC CTTTCTTCTC
    TAGTAAACTC CACTGTTATG TTTGCTCTCT CCCAATCGTC AACTAGTTTG
    TTCAATGCTC ATTTGAAACT ACACTCGTTA CTACTTGTTA CTACACTTGC
    TACACTCTAT TAATATGCAT CACTTGGTAT TTTATGGAGT TTCGTGCTAG
    AGCAACATCA TCTAAGAAAT AAAAAATGAA TGATACTACT GTAGTAGTAA
    TATATTGACA AGATAGATTA ATAGAAAAGG ACAAACACTG TAAATGTTAC
    CTACATTGAC ACTTGACAGA TCAATCAAAG GACCCCAATA TATTACTTTT
    CGGAATAAAA CAACAATCAT GACAAAAGGT ATTAAAAGAT GTAACTATTT
    GAATAAAGAT ATCTGCATTT GTAACATTTT GTATATAGGA GAGATTACAG
    AGACAAGTTG TTTTTTACGA GCTATTAGCT TTATCGGAAT AGTGCAAAAC
    TGTT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 123006 [Map]; Strand: w
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -270; Region: promoter
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -270; Region: promoter
    Flanking Genome Sequence: GT15738 - 5-prime edge
    GTAGACTTGG TGAAGTGTGA TGTCTCCTAG TTTCTTAGGA TAGAGAGCCC 
    CAAAAAAACC TAAACCTAAA CCCAGAGAGA GTGTGCCAGA GTGGGCCTAT
    TTTCTCCTCA CGGACTAACG GCGACGACTC CGAGGCTACA TACTAGTAAA
    TCAAACAACT TGGGTTTTAG TGCAATATAA AATTATTTTG GGCATAAATT
    GTAATTACGG AAACTATTGG GCATAAATTG TAATTATGGA AACGTTTGGG
    CATGAATTGT TATTACGGAA ACTGTTGGGG ATAAATTGAA ATTACGGAAA
    CTTTGGGGGG CTTAATTTGG CTTTTTGCCG GCACGGCAAT GGGAGGAGAC
    GAAACCGAGA GAAACAATGG GAGACGCTGC GATCCGTACC GTCGTCGAAG
    CCATTCACTC ATCTCCGACG CAGGCCGTCG TCTATCTTTG CGGCGGTGCC
    TCTCTGGTTT CACTCTCTCT CTTTATGATT GATTCGTATA TACACAAGTA
    TGTGATTGCT CTGTGCTTTT GAGTGATCGA AATTGAATTC TCTTTCAGGC
    TTTAGGTTGG TTGATGTCGG TTCCTGGAGC GTCGAACACG CTTCTCGAGT
    CCGTGGTTCC TTATTCGAGA GTATCTAT

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR