1. Home
  2. Mutant Lines
  3. GT15750

GT15750

CSHL Arabidopsis genetrap mutant lines

Original: GT15750

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15750

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 132978 [Map]; Strand: c
      • AT4G00310.1 - [+] show detail - Putative membrane lipoprotein
        Distance: -665; Region: promoter
      • AT4G00310.2 - [+] show detail - Putative membrane lipoprotein
        Distance: -669; Region: promoter
    Flanking Genome Sequence: GT15750 - 3-prime edge
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATT 
    AACGGTGACC TTTTTATCCG ACTTCACCAC CATCGTTGCC GCCGCATTCG
    ATCGATCACT AATCACAATT CTCCAGCTCA AGTGGGACAT TCGTGTTCGC
    CCTCTCTCGC CTGTCACGCG TGTCTCTCAC GCTCCACATT TTTTTTAATC
    CCGTTAATCA CACGATCTTA AGGTGTCTGA TTTCACTAAA AACATCGGAG
    GCAAAAAATG AAAAATCCCA TGTGCATGCT CAGTCAAACT CACCCCTCAC
    GTGACACATT GCCTCTATCA CGTGATAGAC GAGTACCATT TCTAGATACA
    ACTAAGATTC ATATAGATCC TTTAGGATTT ATTTTTTTAC AGTGTTGTAT
    GTTTAAATTG AACACATTTA TGCCGTTGAC AAAATTTAAA AGTAAATATG
    AGGTTGACTT TTGATTTATA ACAGATTCGT AGTATAGAAT ATTTACAATT
    GATTGACCAA CAAAAATGAG CAAAGATGTT ACCGTGGGTC GATTCTTTAC
    CTGGGAACTT AAATTTGGTA AAAATTAGCG GCAGCTTTTC TTTTTTAATT
    TTGCCTACTA CTACATCAGA GGGGTATTAT AGGGAACTAG AGTAAAACCT
    AAGGACATTT CCGACCAATG AAAAAAACAT GGAAAATATA AGAAGGGCTG
    AGAAAAGCAA ACAAAAAAAA AGTTTTAATA AACCAAAGAA AAAAAAGACC
    CCTCCTATCG AGTT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 386924 [Map]; Strand: c
      • AT2G01850.1 - [+] show detail - endoxyloglucan transferase A3
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT15750 - 5-prime edge
    AAGCAACATT GTACCTTGCC CGATCATAGC AATGTGAGGA TGTGCGTGAG 
    TCTCCGTCGG AGAACAGTCC ATTTTACTCC TTTGTGAAGA GTGTAATCTC
    TTGCGCCGCA CGAATATCCT CAGCCGCGCC TTCA

AT2G01850.1

Model type
Protein coding
Short Description
endoxyloglucan transferase A3
Curator Summary
EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves.
Computational Description
endoxyloglucan transferase A3 (EXGT-A3); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: phloem or xylem histogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 28 (TAIR:AT1G14720.1); Has 2101 Blast hits to 2091 proteins in 291 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 449; Plants - 1341; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00310.1

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
EMBRYO SAC DEVELOPMENT ARREST 8 (EDA8); Has 49 Blast hits to 49 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 36; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00310.2

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
EMBRYO SAC DEVELOPMENT ARREST 8 (EDA8); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR