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GT15755

CSHL Arabidopsis genetrap mutant lines

Original: GT15755

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15755

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1033100 [Map]; Strand: w
      • AT3G03980.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon2 (3UTR)
      • AT3G03990.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: -668; Region: promoter
    Flanking Genome Sequence: GT15755 - 3-prime edge
    CGACCGTTAC CGACCGTTTT CATCCCTATT CTCAAGGTAT CAGGAAGAGG 
    CTCCTCTCAA GACGAACTCT TTTATACATA TCCACCATTA ACAGGAATGA
    TTTGACCATT GACCCATTCA CCACCGTCAC CAGCCAAGAA TCCAACAAGA
    GGGACCACGT CTTTGGCTTC GCCGACCCTC CCAAAGGGAG ACTCTGCGGC
    TATCTTTTCC ACCAACTCTG GGGTCTTTCC ATCAAAGAAC ATCTCAGTGG
    CGATGGGTCC TGGAGCAACA CAGTTTGCAG TGATTCCTGT TCCTTTGAGC
    TCTTTTGCAA GAATCTTGAC CATAGTTTCC ACAGCTGCCT TTGATGCGGC
    ATAGGCACCA AACCCTGGCT TTAAAGATCG AGTCTGGGAA GATGTCAGAA
    GTATGATCCG ACCACCACCT CCTTGTTTTA GCCTATTGGC AGCTTCCTTG
    CTACACAGGA ACGCTCCTTT TGTGTTGACA CTACACTCCA TTTTAAAGGA
    AACAAACAGA GGATTATTGG AGAATGTCAA AGTGTAGATG TAATGTATAC
    AGTGAAACCA AGAAACTTTA GTTGGAAATT AGACATACAA ATCTCACGAA
    CATGGAAAAC ATTGGATGAA ACAAAAAACA TAAGTCGATT AATTAGACAC
    AAGAACACGA GACATGTTGC ATTTGACTCA TAATTAGACA TACAAATCTA
    AAGAACACGG AACATATAAT TTCATGGTTC AT

AT3G03980.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G04000.1); Has 125329 Blast hits to 125098 proteins in 3700 species: Archae - 987; Bacteria - 82672; Metazoa - 6160; Fungi - 6506; Plants - 2912; Viruses - 12; Other Eukaryotes - 26080 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G03990.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G37470.1); Has 7052 Blast hits to 7050 proteins in 1427 species: Archae - 69; Bacteria - 5615; Metazoa - 94; Fungi - 57; Plants - 279; Viruses - 0; Other Eukaryotes - 938 (source: NCBI BLink).
Link
InterPro Scan - TAIR