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GT15806

CSHL Arabidopsis genetrap mutant lines

Original: GT15806

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15806

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2394217 [Map]; Strand: w
      • AT4G04710.1 - [+] show detail - calcium-dependent protein kinase 22
        Distance: -1330; Region: intergenic
      • AT4G04720.1 - [+] show detail - calcium-dependent protein kinase 21
        Distance: 241; Region: intergenic
    Flanking Genome Sequence: GT15806 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACTTTTGA 
    GCTACCACAC GTGCCTCCTA GCTTATCAAT ACTCTTGCCC TCGAATAATG
    TAGCTTGTTC TCAGGCGCAA AAGAAAAACA TTTTGCTGTT GCATCACTGT
    TACTAAATCC AATGTGACTT CTACTCCCAA TAATCTGCTC AAGCACTGAT
    TGAATCTTTT TATATGTTTC AACTCCTTGA GACACATTCT GCTT
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2394280 [Map]; Strand: w
      • AT4G04710.1 - [+] show detail - calcium-dependent protein kinase 22
        Distance: -1393; Region: intergenic
      • AT4G04720.1 - [+] show detail - calcium-dependent protein kinase 21
        Distance: 178; Region: intergenic
    Flanking Genome Sequence: GT15806 - 5-prime edge
    CTTTCTCCCT GCTCAAAGGA TTCGTTGAGG CTCGTGAGTA AGCAAAGAGA 
    AGCAGAGAAG GCACGTGAAA CAGAGTTAAA ACAGAGCAAG AAGAAACAGA
    TTGTGTAACC AATTGAGAGT TGTATATAAA TAGATAGAAG AGTATTGAAA
    AAGTTATGCA TTAATGCATG TATAGATGTG TGTGTAACAA ACTTATCGTT
    TGCTAGAGAA GAGTTAAGAA ATCTCTTGAA CAAATCTCCA TTGTTAGAGT
    TCTTGAGTTT GTATCTTGGA TTGAGAAGTG ATAAGAGAGA TTCATAAGGA
    ACTATTACTA GCAAAAGATT ACACTTAAAG CTCATAAGGA TTAAGAAAGT
    TCTCAAGAAA GTTTCAAAAA AATATAAGTG GATATGTTAC TGTTACAAGG
    AGCTAAGACA TGACAGTCTC TCAAAATCAG TTTCAGACTA ACTAAGGAGA
    AGGATAAATA AATCTGTTCA AACACAGAGA AGATAGAACA ACATTTTGAG
    ACAGTATATC AACTATGCTC ACCTCGGTTT ACCCCCGGTT TAGCTCTTCT
    ACTCTGGGTT CAAGAATCGC TTTCGGTTGA TAAACCGTTG GGATTTATGC
    CGACTTGATC AATGGAATGG AAGCAGTTTC CCCTGTGGCT GTGTGCTGCC
    ACTTCTCATC ATCGCGCAAA ATTCTTCAAA GTTTATTCTT CCATCCTGTA
    ACATAGTTCA TTACAAGGTT TCAAGAACCA GTTTAATGTT TGAGATGTTG
    GCTTAAATGT TAGAGAGTGC AACTTACATT GTCGGTATCA

AT4G04710.1

Model type
Protein coding
Short Description
calcium-dependent protein kinase 22
Curator Summary
member of Calcium Dependent Protein Kinase
Computational Description
calcium-dependent protein kinase 22 (CPK22); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 21 (TAIR:AT4G04720.1); Has 128215 Blast hits to 115900 proteins in 4387 species: Archae - 146; Bacteria - 12831; Metazoa - 47241; Fungi - 17786; Plants - 26994; Viruses - 481; Other Eukaryotes - 22736 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G04720.1

Model type
Protein coding
Short Description
calcium-dependent protein kinase 21
Curator Summary
member of Calcium Dependent Protein Kinase
Computational Description
calcium-dependent protein kinase 21 (CPK21); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 15 (TAIR:AT4G21940.1); Has 137194 Blast hits to 129287 proteins in 3977 species: Archae - 168; Bacteria - 14125; Metazoa - 50898; Fungi - 18038; Plants - 29874; Viruses - 499; Other Eukaryotes - 23592 (source: NCBI BLink).
Link
InterPro Scan - TAIR