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Mutant Lines
GT15853

GT15853

CSHL Arabidopsis genetrap mutant lines

Original: GT15853

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15853

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 1476312 [Map]; Strand: c
- AT4G03360.1 - [+] show detail - Ubiquitin family protein
  Distance: -460; Region: promoter

TAGAGGTATT TACCGACCGT TACCGACCGT TTTCATCCCA TGAGCTTGTA 
ACCCATGTGG GGACATTAAG ATGGTGGAAC ACTGGCTCGG GTCCACGGGC 
CGGTTCTGTT GTTGGCATGT TTCTGGGCTG CCCAGTCCAA GCTGTGAGTA 
AGACGTGTGT GTCAAGCGAA GGCTTGGCTC AAACGGCTTC TAAAGTTGGA 
GGGCAATGCG TGAGGCTGGT TTCACAGAGC AGTGATTACT TCCCGCTTAC 
AGCAGTGGAC GGATCACGGT TTGGCGTCGC TCAAAACCAC TATGGCCTGC 
TGGTCCGATC TCATATGAAC CACCATTTTT TCCCTCCTTT GATTTTGTTT 
TCCAAAACTT TCTACGCTTT TTGTTT

5 prime edge [+] show sequence

Chromosome: 4; Position: 1472686 [Map]; Strand: c
- AT4G03340.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
  Distance: -2606; Region: intergenic
- AT4G03350.1 - [+] show detail - ubiquitin family protein
  Distance: 1032; Region: intergenic

CTTTCTCCCT GAGCTCTGTT ACTTAGCTCG ACGTACCAAA GATCGGTTCG 
TGTAATATAT AAACAAACAC AAAATGAGTA CAGTGACCGA TGTGGGAGAA 
AAGACTCTGA ATTTAGTTTT GATTTGTGAC TTATCTTTTT GATGTGGGCC 
AAAGCCTTAT TTTGAGTCCC ATTATAGACT AATAAAAAGC CCAATAGTGA 
AATAGTATAC ACAGATTTAA GATAGAAGAA GAGAGCGGCA AAGAAATCAA 
ATGCAAGAAG AACATGAGTT AATATTATTC CCAATAAAAC TCACTTACTT 
GAGAACATCA GAGATTGAAC ATTTAATTAC TTTCTGGTAA CAACATTCAG 
GTAAAATCTT TGCCAATTTA CCTCAACTAA ATTTTACGTA GTGTCACAAA 
ACCTCAACTA CCTCAATTTA TCTACGTAGT GTCACAAAAC CTCAACTATA 
ATTTTACGTA CTATCTAAAG GTTGTGCTTG GTTTTGACCT CAAACTTTGC 
TTTAAAGCTC ATCTTTTTGC GATTCTTGAA CGCGTTGCTC TTCCCAATTG 
TTAGAGAACT TCACCTCGCA ATAACCCTAC TCAGAACCAA GTCCCTCAAT 
CTCCATCAAA ATAATCTTTC ACGTTTGTTG ACAAGGAAAA ATAGATAAAT 
CTCTTTCAAA AATAGCAATT TGAGAGAAAG AAAAGCAAAA TAATA

AT4G03340.1

Model type: Protein coding
Short Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Computational Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT1G03520.1); Has 946 Blast hits to 946 proteins in 119 species: Archae - 0; Bacteria - 46; Metazoa - 549; Fungi - 0; Plants - 315; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G03350.1

Model type: Protein coding
Short Description: ubiquitin family protein
Computational Description: ubiquitin family protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: 7SL RNA1 (TAIR:AT4G02970.1); Has 8392 Blast hits to 3833 proteins in 622 species: Archae - 0; Bacteria - 4; Metazoa - 3676; Fungi - 1041; Plants - 2216; Viruses - 160; Other Eukaryotes - 1295 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G03360.1

Model type: Protein coding
Short Description: Ubiquitin family protein
Computational Description: Ubiquitin family protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin family protein (TAIR:AT4G02950.1); Has 305 Blast hits to 295 proteins in 81 species: Archae - 0; Bacteria - 3; Metazoa - 39; Fungi - 37; Plants - 169; Viruses - 17; Other Eukaryotes - 40 (source: NCBI BLink).
Link: InterPro Scan - TAIR