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Mutant Lines
GT15858

GT15858

CSHL Arabidopsis genetrap mutant lines

Original: GT15858

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15858

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 2933000 [Map]; Strand: w
  - AT1G09090.1 - [+] show detail - respiratory burst oxidase homolog B
    Distance: 0; Region: exon1 (CDS)
  - AT1G09090.2 - [+] show detail - respiratory burst oxidase homolog B
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT15858 - 3-prime edge
```
CCCAGCCTCT ACCAACGGCG TCGTTTTTGG CAATGAACCT CAACCCTCGA 
AGAGCAAACA TAGCACCGAA CGACTTACTA CGGTCGAGCC GGCGTGAAGC 
AAACGATAGC GACTTAACCA TCGTTTTCAG CCGCCCGGAA AGAACCGAAC 
GAAGTGTCGC CTTGGCCTT
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 2933107 [Map]; Strand: w
- AT1G09090.1 - [+] show detail - respiratory burst oxidase homolog B
  Distance: 0; Region: exon1 (CDS)
- AT1G09090.2 - [+] show detail - respiratory burst oxidase homolog B
  Distance: 0; Region: exon1 (CDS)

CTTTATCCCT GGCTGGGATG AGGTTGCAAT GAGGTTTGAT AAGTTGGCCG 
TTGAAGGGAA ACTCCCTAAA TCCAAATTTG GACATTGCAT AGGTAAACAA 
AAAAACTTTA AATAATATAC CTTTTTTGGT TTCATTTTTT TCTCTCTGTA 
ATTTCACTGC AATACTCAAC TTGTTTCTCA TATACAGTTT TGTTTTTTTA 
TTACTTTTTT TTTAACTGAA TTTTAAAAGA ATTATTTCAA CTAAATAGGA 
ATGGTTGAAT CTAGCGAATT TGTGAACGAG CTTTTTGAGG CGTTGGTCCA 
AAGGAGAGGG ACTACGTCAT CGTCAATCAC CAAAACTGAA TTGTTTGAAT 
TCTGGGAGCA AATCACAGGC AATAGTTTTG ATGATAGGCT GCAAATCTTT 
TTTGATATGT AAGCATGATT TTATATTTAT TTATAGTATT TTGACAAGTA 
TAATGCATGA TTATCATTTG TCATAAAATA TGGAAAGTTG ATTAGTTATC 
TCTTTGGGTT TATGAATATA AGGGTGGACA AAAATTTGGA CGGACGTATT 
ACAGGAGATG AGGTTAAGGA GGTGAGGTAT ACCTTATTAA ATTGATCTCA 
ATTTCGTTAT GGCCCTAATA TAAAAATGTT ACAATCTA

AT1G09090.1

Model type: Protein coding
Short Description: respiratory burst oxidase homolog B
Curator Summary: NADPH-oxidase AtrbohB plays a role in seed after-ripening. Major producer of superoxide in germinating seeds. AtrbohB pre-mRNA is alternatively spliced in seeds in a hormonally and developmentally regulated manner. ABA caused accumulation of AtrbohB-
Computational Description: respiratory burst oxidase homolog B (RBOHB); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: response to heat, seed germination, defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: embryo, root; EXPRESSED DURING: imbibition; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase homologue D (TAIR:AT5G47910.1); Has 1619 Blast hits to 1551 proteins in 238 species: Archae - 2; Bacteria - 81; Metazoa - 636; Fungi - 280; Plants - 489; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G09090.2

Model type: Protein coding
Short Description: respiratory burst oxidase homolog B
Curator Summary: NADPH-oxidase AtrbohB plays a role in seed after-ripening. Major producer of superoxide in germinating seeds. AtrbohB pre-mRNA is alternatively spliced in seeds in a hormonally and developmentally regulated manner. ABA caused accumulation of AtrbohB-
Computational Description: respiratory burst oxidase homolog B (RBOHB); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: response to heat, seed germination, defense response; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: embryo, root; EXPRESSED DURING: imbibition; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: respiratory burst oxidase homologue D (TAIR:AT5G47910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR