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Mutant Lines
GT15914

GT15914

CSHL Arabidopsis genetrap mutant lines

Original: GT15914

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15914

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 12562652 [Map]; Strand: w
- AT4G24204.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: intron1 (5UTR)
- AT4G24204.2 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon1 (5UTR)
- AT4G24204.3 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT4G24210.1 - [+] show detail - F-box family protein
  Distance: -901; Region: promoter

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTATTA 
ATATATATAT GCGAGTAACT TGTATTTTGC AGGATGAGTT CGTTCGATGG 
TACTTGGGGC TATCCTTCTC AGCTAGAGTG GTGATTTATA TTACAGTTTT 
GGGTACTATA TTTCTCCCAT ATTTATATAA TTAGCATATG GAGTACTATT 
TATCTTCAAT GTAGAGCTAA TTTGTTTGTT TTTTTGTTTT TGTTATTGTT 
TCTCAGGGAC AATAATGACG ATTACTTATT TGGTATTGAA ATTCCTGAGC 
GAATGTGACA TGGAGGATGA CACACAGAGG CTACCATTGG TGGCAGAAGA 
AGAAGTCACC ACCGTTTGGA CGCCGCCGTT GATCAATGAG TCGTTGGAGG 
TAACGGGGAA GGGAGATGTA GAAACGGCGT CGTTTAGCTC GTCGGATGAT 
GTGGACTACT CGACACTGTG TGTTATATGC TTCGAGGAAC GTAGAAACTG 
TTTCTTTGTA CCGTGTGGTC ACTCTGCCAC TTGTCGCGGC TGTGCTCAAA 
GGATCTTGTC GGAAGAAAGT AAGGTGTGTC CGATTTGCCG AAGGGTGATA 
CGCAAATCAA AGAGATTAGT GTTGAAAAAG CTTTGAGCGC CGTTGCTTTG 
CCTAATCACC ATTTTGCGAA CTCATGCTTC CAAG

5 prime edge [+] show sequence

Not mapped

ACTTTCTCCC TGTATACAAT CCATGGTTTC GTCAAGTTTT TTTTTTTTCT 
AAAAAATTGG GTAAGGCTGG GCCCTAGGGG GGCCCCCCCG TTCCCCGAGG 
GAACCTGGGG GGATTTTTTT TTCCGGAAAA ACTTTTTTAA AACCTGCAAA 
CTTTTTGGGA CCGGGGCCCC AAACTTTTTC AAAAAAAAAA AAGGCCCCCG 
GGAAAAAAAA AAGGATTTGT CCCCCCCGGA AGTTATTTGG AATTTCTTTT 
GGTTGGGAAA AGGGCTTTAA ACAAAGGATT TTCGGATTAT TCCCAACCAA 
TTGCCCCCCC CCGGCCGGAA AAAAAAGATG GGGCCAAAAA CCCCCCCGGG 
CACCCCATTT TTTTTATTTT GCCCAAAAAA AGGGGCAAAA TCCAGGTGGC 
GGCCCCAACC TTAAAAAGAA GGGGCCGGAC CATTTCCCAA CCCCGGATTA 
AAAAACCCCT TTTTGTAAAA AGGGCCATTT CAGGGGAAAA AAGGAAAGGG 
CCCCCAAAAA ATTCCCCCGG TTTAAGCCCA AACCCGCTGA TTCTTTTATC 
GGAAAAACCG GGGGGCTAAA TTAGCCAAAG GTGGAAAAAA AATTTAAAAA 
AGGGATTACC CGTTAATCCC CAAAAATTCC AAGGGGCCCC C

AT4G24204.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38185.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G24204.2

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38185.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G24204.3

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G38185.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G24210.1

Model type: Protein coding
Short Description: F-box family protein
Curator Summary: F-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins.
Computational Description: SLEEPY1 (SLY1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G48170.1); Has 122 Blast hits to 122 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR