1. Home
  2. Mutant Lines
  3. GT15917

GT15917

CSHL Arabidopsis genetrap mutant lines

Original: GT15917

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15917

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5695187 [Map]; Strand: c
      • AT2G13680.1 - [+] show detail - callose synthase 5
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15917 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACATGAGA CGGCCATCTC 
    GTAGTGCTGC CACAACAGTG TCTATTGAAG TTTTTGATCA TGAGGTGGTT
    CCGGCCTCCC TTGGTACCAT TGCTCCTATT CTGCGTGTTG CTGCAGAGAT
    TGAACATGAG CGCCCTCGTG TTGCCTATCT CTGTATGTAT TTGCGTTTCC
    TTGTTGTTTT GTTTGCAGAA TTAAGCTGAT ATACTTCACT TGCTGTGTGA
    CTCACTTGAA ATTTTCCTTG GAATTTGTAT ATAGGTCGGT TTTATGCATT
    TGAGAAAGCT CACAGGTTGG ATCCAAGCTC TGGTGGTCGA GGTGTGAGGC
    AGTTTAAGAC ACTTCTCTTT CAAAGATTAA AAAGGGTAAT CATCCTCTTA
    CTATT
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT15917 - 5-prime edge
    AACACATATC AAAGCCAAAA AAACC

AT2G13680.1

Model type
Protein coding
Short Description
callose synthase 5
Curator Summary
Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen.
Computational Description
callose synthase 5 (CALS5); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR