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GT15919

CSHL Arabidopsis genetrap mutant lines

Original: GT15919

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15919

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 176447 [Map]; Strand: w
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: -40; Region: promoter
    Flanking Genome Sequence: GT15919 - 3-prime edge 
    TTATATACTA CACGCAAAAT GTGGCCCGTT TATTACATAA ATGGGCTTGG 
    TCATATCTTT TTATACATCA AAGTTTTATT TTTTCTAAAA ATGAGCCATT 
    CATTATTTTC CTAAATCGAA ATCACAGATG AAAGCGAACA TGTCGTCGTC 
    GTCTTCCACT CGATACAGAT CCTTCTTCGT CTTCCCAATT CTCTTCGCCG 
    TCTTGTTCCT GGGACTTCTG ATTCCCTCCT CCGCCGATAA CCGCCACGTT 
    ATCAACTTCC GATCGCCGGG ACTCTACCCG GAGGGACTAA CCTGGGATCC 
    AAGGGACCAG CATTTTCTAG TCGGTTCTCT CCACAGCCGC ACAATTCATT 
    CCGTCTCCGA CGCTGGAGTC ATCGAAACCC TAATCTCCGA TCTCGATCTA 
    CCGGAGAACT CCACTATCCT CGGTCTCGCC GTTGACTCTA CTAATCGCCG 
    TCTCCTTGCC TGTATCCAGA GTTTGCCGCC TCTCCCTCCC TTCAGTGCCC 
    TAGCCTCCTA CGATCTCCGC AGCGGAGGCC GTCGTGTATT CCTCTCTCCT 
    CTCCCGTCTC TTCCCGGAGA CGACGAAGAC ATCGCTCGTG ATGTCGCCAA 
    TGACGTGGCG GTTGATTTCA AAGGAACGCT TACGTCACCA CTCAGCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 176615 [Map]; Strand: w
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: -208; Region: promoter
    Flanking Genome Sequence: GT15919 - 5-prime edge 
    CCTACTTTCT CCCTGGAGAA ATGCATTGCT GTTTTATTGG CAGCTACTAA 
    TGATTTGGTT TTGCTGATGG GCTCTTAATA GACGTCTCTC CACTATACCC 
    TATACTTAGA CTATCAGGGC GAATCATGGA TATCTTTGTT ACTGTAATAT 
    TCTTAAATAT AGGCCCACCT TTCAAATCTT GAATCAATCG GTCGGCTTTT 
    TAGGCCCAAA TAAACCTTTT TATTACTAGA CCTCGTAAGT GACCAAAATG 
    GAAAAAATGT CAAAAAAATC ATAAATTTTT AAATTTGAAG CGGAAAAACA 
    TAAATTTTCG AAATGTTATT AAAATCCTAA AGTTTAGTTT GACTTTATTA 
    TAAATTAGTT AAATTTGATT GATTGGATCA TTTTAGGCAT ATTGATAAAT 
    TTCCATTAAT AAAAAGATGA CATAGTTAAC TTTTCGTAGT TAACTTTTCG 
    TAACGTTTGG AAAATAAATC AATTTTATAC ATACATATGA GGTATCGTTA 
    AAAAGAAAAA CTAGTACAAT GTATGGTGAA AAAGCTTGTA AAGTATCTTT 
    CTAAATACAT ATAAGGTATT GTTATAAACC CAAACGTAAC GGAAAATTAA 
    CAAAGTAAGT GATTTAGCCT CCTAGAAAAA TACAGTACAT GATGGAACAC 
    ATCATGCTTT GAGGTGGTAC GAGAGCCATT GATACCGCGA CCAAGCCCGG 
    TCATGACCTA GAGGCGAAGC CCA

AT2G01410.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR