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GT15933

CSHL Arabidopsis genetrap mutant lines

Original: GT15933

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15933

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9126864 [Map]; Strand: w
      • AT2G21320.1 - [+] show detail - B-box zinc finger family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT15933 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTTCCA GCTTCAATAG 
    AGTGACTGTA ACTGTAAATA AAGTGTGTCA CCAGAGATAA TGCTATATGC 
    AAAGTTCAAA TTATTATGAC AAGCTAAAAT CACTAGAATG TTTCTTTAAC 
    AATCAAAACA CAACTTTTGG TACTACTTTG GCCATGTTCG AGTTATAATA 
    ACCTCAAAAT CTATAAATTT AGCACTTCAA CCAGATATTG TCTCAAAATT 
    TCAAACTTTT TGCATTTGTT GAGATAAAAG TGTTAATCTA AGAAAAATGA 
    GATTTTTTTC AGGTAAAGGT GGTTACTTTT TCTCTCCACG AGCAACAGAG 
    GGCAGCTTCG TCGGCGGCGC AAAAGACGAT AGCGGCGGCG CTCTCACAAG 
    CATCACACAA AATTCGCATG GTTTTTTTTA CTCAAACGAC TAGTCTCACT 
    TTCAAAGTTA GCATCTTTCG CCAAACCCAA ATTCTGACTG TTGAAGCGGA 
    AGATGGAGAG ACTAAAGGGT TTAGGATTAA TGGATAATAC GAGATAAAGT 
    AAGAAGAGGA AGGAGATTTT TTGAATCAAA CTATCTCTGA GAAGAAGAAG 
    AAGAAGAAGA AGAAGAAAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9126936 [Map]; Strand: w
      • AT2G21320.1 - [+] show detail - B-box zinc finger family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT15933 - 5-prime edge 
    TTTCTCCCTG GCTGGAAGAG CTATGAGAAT TTTTGTTATC TGCAATGGCT 
    TTGATTGAGG AAGTGGTTAG ATATAAGTTA TAAGAAAGAA ACATTTTTCT 
    TTGTGTGTTT AGGTTCATAA GTGCAACAAG CTGGCTAGTC GGCATCTTCG 
    TGTAGGCTTA GCTGATCCGA GTAATGCACC AAGCTGTGAC ATATGCGAAA 
    ATGCACCCGG TATAGATATG ATTCCTCTTT CTTTTGTGTA TAAGAGGAAG 
    CGGAAGTTTC AGTTTTTGAC ATGTTTGTTT TGTTGTTGAT CGATGAACAG 
    CATTCTTTTA CTGTGAGATA GATGGTAGTT CCCTTTGTCT ACAATGTGAT 
    ATGGTGGTAC ATGTTGGTGG GAAGAGAACA CATAGGCGGT TTCTATTACT 
    GAGACAGAGA ATTGAGGTTT GACTTTTGAA AAATCCAGGA TCTTGAAGCA 
    TTCTTGATTT GTGGTATTGA CTGTTCTTTA CAATGTTGTG TTCTTGTAGT 
    TTCCAGGCGA TAAGCCTAAT CATGCTGACC AACTGGGACT ACGGTGTCAA 
    AAGGCTTCCT CTGGTCGTGG TCAAGAATCA AATGGGAATG GTGATCATGA 
    TCATAATATG ATCGATCTTA ACTCCA

AT2G21320.1

Model type
Protein coding
Short Description
B-box zinc finger family protein
Computational Description
B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G38960.1); Has 1943 Blast hits to 1369 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 1819; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).
Link
InterPro Scan - TAIR